DRSC/TRiP Functional Genomics Resources

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Protein Alignment fdl and hexa

DIOPT Version :9

Sequence 1:NP_725178.2 Gene:fdl / 250735 FlyBaseID:FBgn0045063 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001017763.1 Gene:hexa / 550460 ZFINID:ZDB-GENE-050417-283 Length:532 Species:Danio rerio


Alignment Length:617 Identity:182/617 - (29%)
Similarity:280/617 - (45%) Gaps:140/617 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 AKRVSFISCSMT-----------CGDVNIWPHP------TQKFLLSSQTHSFSV-EDVQLH---- 135
            ||...|..|.::           ||   :||.|      .:...||.|..:|:. :|....    
Zfish     5 AKSPRFCCCLLSVVFVSQFVERVCG---VWPLPQEIQQSAESSGLSPQLFTFTYSQDSAAQAGCS 66

  Fly   136 -VDTAHREVRKQLQLAFDWFLKDLRLIQRLDYVGSSSEPTVSESSSKSRHHADLEPAATLFGATF 199
             :|||   .::...:.|..|.||                        :.|...|||.|.:.    
Zfish    67 VLDTA---FKRYFSIIFPDFTKD------------------------ALHDMWLEPKAFVL---- 100

  Fly   200 GVKKAGDLTSVQVKISVLKSGDLNFSLDNDETYQLSTQTEGHRLQVEIIANSYFGARHGLSTLQQ 264
                     ||.||   .:..|.....|:||:|.||. :||   |..:.:.:.:||..||.:..|
Zfish   101 ---------SVSVK---TRGCDGYPDEDSDESYNLSV-SEG---QAVLRSVTVWGALRGLESFSQ 149

  Fly   265 LIWFDDEDHLLHTYANSKVKDAPKFRYRGLMLDTSRHFFSVESIKRTIVGMGLAKMNRFHWHLTD 329
            |::.|  |:..:....:::.|.|:|.:|||:||||||:..:.:|.:|:..|..:|.|.||||:.|
Zfish   150 LVYRD--DYGAYFVNKTEIVDFPRFAFRGLLLDTSRHYLPLHAILKTLDAMAYSKFNVFHWHIVD 212

  Fly   330 AQSFPYISRYYPELAVHGAYSE-SETYSEQDVREVAEFAKIYGVQVIPEIDAPAHAGNGWDWGPK 393
            ..||||.||.:|:|:..||:.. :..|::.||..|.|.|::.|::|:||.|:|.|..:   ||  
Zfish   213 DPSFPYQSRTFPDLSKKGAFHPFTHIYTQSDVMRVIEHARMRGIRVVPEFDSPGHTQS---WG-- 272

  Fly   394 RGMGE-LAMCINQQPWSFYCGEPPC---GQLNPKNNYTYLILQRIYEELLQHTGPTDFFHLGGDE 454
            :|..: |..|        |.|..|.   |.::|..:.||..::|:.:| ::...|..:.||||||
Zfish   273 KGQPDLLTPC--------YKGGKPSGTYGPVDPTVDTTYRFMERLLKE-VKFVFPDSYVHLGGDE 328

  Fly   455 VNLDCWAQ------------YFND-TDLRGLWCDFMLQAMARLKLANNGVAPKHVAVWSSALTNT 506
            |:..||..            :..| |.|...:.:.::...|.|.        |...||.......
Zfish   329 VSFACWQSNPSVGKFMEKMGFGRDFTKLESFYMESIMNITAALN--------KTSIVWQDVFDYH 385

  Fly   507 KCLPNSQFTV-QVWGGSTWQ-ENYDLLDNGYNVIFSHVDAWYLD-CGFGSWRATGDAACAPYRTW 568
            :.:|  |.|| ::|.|.|:| |...:...|:.|:.|  ..||:: ..:|             :.|
Zfish   386 ERIP--QGTVLEIWKGETYQTELSKMTKAGHRVLLS--APWYINHITYG-------------QDW 433

  Fly   569 QNVYKHRPWERMRLDKKRKKQVLGGEVCMWTEQVDENQLDNRLWPRTAALAERLWTDPSDDHDMD 633
            :|.|..:| :.....:::||.|:||||.||.|.||...|:.|||||..|.|||||::.....:.|
Zfish   434 RNSYAVQP-QNFSGTEEQKKLVIGGEVAMWGEYVDATNLNPRLWPRACAAAERLWSNEEKTLNAD 497

  Fly   634 IVPPDVFRRISLFRNRLVELGIRAEALFPKYC 665
            :    .|.|:..||..||..||:||.||..:|
Zfish   498 L----AFPRLEEFRCELVRRGIQAEPLFVGHC 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fdlNP_725178.2 Glycohydro_20b2 110..265 CDD:291511 38/166 (23%)
GH20_HexA_HexB-like 289..654 CDD:119332 125/385 (32%)
hexaNP_001017763.1 Glycohydro_20b2 30..150 CDD:291511 38/166 (23%)
GH20_HexA_HexB-like 172..514 CDD:119332 125/385 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580454
Domainoid 1 1.000 191 1.000 Domainoid score I3177
eggNOG 1 0.900 - - E1_COG3525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 220 1.000 Inparanoid score I3531
OMA 1 1.010 - - QHG54329
OrthoDB 1 1.010 - - D164123at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6615
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22600
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X846
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.910

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