DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fdl and hexb

DIOPT Version :9

Sequence 1:NP_725178.2 Gene:fdl / 250735 FlyBaseID:FBgn0045063 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_009299722.1 Gene:hexb / 323613 ZFINID:ZDB-GENE-030131-2333 Length:544 Species:Danio rerio


Alignment Length:597 Identity:177/597 - (29%)
Similarity:269/597 - (45%) Gaps:131/597 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 DVNIWPHPTQKFLLSSQTHSFSVEDVQLHVDTAHREVRKQLQLAFDWFLKDLRLIQRLDYVGSSS 171
            ::::||.| ||:..|:.....|....|:    .|   .||                      |::
Zfish    34 EISLWPLP-QKYQSSAVAFKLSAASFQI----VH---AKQ----------------------STA 68

  Fly   172 EPTVSESSSKSRHHADLEPAATLFGATFGV--------KKA--GDLTSVQVKISVLKSGDLNF-- 224
            .|:.|...:..|.:         |...||.        |||  .||:.:||.|:   |.|...  
Zfish    69 GPSCSLLENAFRRY---------FEYMFGELKRQEKSRKKAFDSDLSELQVWIT---SADPECDG 121

  Fly   225 --SLDNDETYQLSTQTEGHRLQVEIIANSYFGARHGLSTLQQLIWFDDEDHLLHTYANSKVKDAP 287
              ||..||:|.||.......|:    |.:.:||..||.|..||::  ::|:.:.....:.:.|.|
Zfish   122 YPSLRTDESYSLSVDETSAVLK----AANVWGALRGLETFSQLVY--EDDYGVRNINKTDISDFP 180

  Fly   288 KFRYRGLMLDTSRHFFSVESIKRTIVGMGLAKMNRFHWHLTDAQSFPYISRYYPELAV--HGAYS 350
            :|.:||::||:||||..::.|...:..|.:.|.|.||||:.|..|||::||.:|||:.  .|||.
Zfish   181 RFAHRGILLDSSRHFLPLKVILANLEAMAMNKFNVFHWHIVDDPSFPFMSRTFPELSQKRKGAYH 245

  Fly   351 E-SETYSEQDVREVAEFAKIYGVQVIPEIDAPAHAGNGWDWGPKRGMGE-LAMCINQQPWSFYCG 413
            . :..|:..||:.|.|||::.|::|:.|.|.|.|..:   ||  .|:.: |..|        |.|
Zfish   246 PFTHVYTPSDVKMVIEFARMRGIRVVAEFDTPGHTQS---WG--NGIKDLLTPC--------YSG 297

  Fly   414 EPPCGQLNPKN---NYTYLILQRIYEELLQHTGPTDFFHLGGDEVNLDCW------AQYFND--- 466
            ..|.|...|.|   |.:|..:.::::| :....|..:.|||||||:..||      .::.|.   
Zfish   298 SSPSGSFGPVNPILNSSYEFMAQLFKE-ISTVFPDAYIHLGGDEVDFSCWKSNPDIQKFMNQQGF 361

  Fly   467 -TD---LRGLWCDFMLQAMARLKLANNGVAPKHVAVWSSALTN-TKCLPNSQFTVQVWGG--STW 524
             ||   |...:...:|..:|..|        |...||.....| .|...::|  :.||.|  ...
Zfish   362 GTDYSKLESFYIQRLLDIVAATK--------KGYMVWQEVFDNGVKLKADTQ--IHVWKGRPQYQ 416

  Fly   525 QENYDLLDNGYNVIFSHVDAWYLD-CGFGSWRATGDAACAPYRTWQNVYKHRPWERMRLDKKRKK 588
            .|...:...|::.:.|  ..|||: ..:|             :.|.::||..| :.......:||
Zfish   417 DEMAKVTAAGFSALLS--TPWYLNRVSYG-------------QDWVDIYKADP-QNFNGTDAQKK 465

  Fly   589 QVLGGEVCMWTEQVDENQLDNRLWPRTAALAERLWTDPSDDHDMDIVPPDVFRRISLFRNRLVEL 653
            .|:|||.|:|.|.||...|..|||||.:|:|||||:|.|   ..|:  .:.:.|::..|.|:|..
Zfish   466 LVIGGEACLWGEYVDATNLTPRLWPRASAVAERLWSDAS---VTDV--GNAYTRLAQHRCRMVRR 525

  Fly   654 GIRAEALFPKYC 665
            ||.||.||..:|
Zfish   526 GIPAEPLFVGHC 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fdlNP_725178.2 Glycohydro_20b2 110..265 CDD:291511 42/168 (25%)
GH20_HexA_HexB-like 289..654 CDD:119332 123/388 (32%)
hexbXP_009299722.1 Glycohydro_20b2 37..160 CDD:291511 42/168 (25%)
GH20_HexA_HexB-like 182..526 CDD:119332 123/388 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580455
Domainoid 1 1.000 191 1.000 Domainoid score I3177
eggNOG 1 0.900 - - E1_COG3525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 220 1.000 Inparanoid score I3531
OMA 1 1.010 - - QHG54329
OrthoDB 1 1.010 - - D164123at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6615
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22600
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2560
SonicParanoid 1 1.000 - - X846
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.940

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