DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scarb1 and CG31741

DIOPT Version :9

Sequence 1:XP_038945027.1 Gene:Scarb1 / 25073 RGDID:2302 Length:516 Species:Rattus norvegicus
Sequence 2:NP_724088.2 Gene:CG31741 / 35079 FlyBaseID:FBgn0051741 Length:491 Species:Drosophila melanogaster


Alignment Length:252 Identity:74/252 - (29%)
Similarity:128/252 - (50%) Gaps:11/252 - (4%)


- Green bases have known domain annotations that are detailed below.


  Rat   162 LKLLMTLGLVTMGQRAFMNRTVGEILW-GYEDPFVNFLSKYFPDMFPI-KGKFGLFVGMNDS--S 222
            |:.:|...|...|....|..|.|:.|: ||.|..::|:.:....:.|: ...||.|...|:|  :
  Fly   156 LRKVMNFTLNREGGATHMTHTAGQWLFDGYYDHLLDFVEQLHSPLLPVYDNTFGWFYERNNSKTA 220

  Rat   223 SGVFTVFTGVQNFSKIHLVDKWNGLSEVNYWHSEQCNMINGTAGQMWAPFMTPESSLEFFSPEAC 287
            .|.||:.||..:.|::..:..|||.:...::..| |..:||:.|::|:|:.|.:.....|.|:|.
  Fly   221 EGNFTLHTGRGDLSQLGDLLLWNGENTTGFYPGE-CGKVNGSTGELWSPYRTWDQPTTIFLPDAA 284

  Rat   288 RSMKLTYQESRVFEGIPTYRFTAPDTLFANGSVYPPNEGFC----PCRESGIQNVSTCRFGAPLF 348
            |.:.|..:|:...:||..:|:.:.:....||.:.|..|.||    .|..:|:.:.....|..|.:
  Fly   285 RYLNLFPKENLTIDGIDVWRYESTNLTIDNGQLSPDTECFCLKNRECPRNGVLDYGPPAFNGPFY 349

  Rat   349 LSQPHFYNADPVLSEAVLGLNPDPKEHSLFLDIHPVTGIPMNCSVKMQLSLYIKSVK 405
            :|.|||:..|.:..|...||.|:..||.:::.:.|..|||:  |::.||.:..|.|:
  Fly   350 MSHPHFFLTDQMYRENTTGLQPEESEHGMYVIMEPTLGIPL--SLRGQLMISTKVVR 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scarb1XP_038945027.1 CD36 <148..454 CDD:395898 74/252 (29%)
CG31741NP_724088.2 CD36 21..469 CDD:279474 74/252 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342073
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.860

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