Sequence 1: | XP_038936774.1 | Gene: | Myo5a / 25017 | RGDID: | 3143 | Length: | 1880 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523860.2 | Gene: | zip / 38001 | FlyBaseID: | FBgn0265434 | Length: | 2056 | Species: | Drosophila melanogaster |
Alignment Length: | 2021 | Identity: | 549/2021 - (27%) |
---|---|---|---|
Similarity: | 908/2021 - (44%) | Gaps: | 438/2021 - (21%) |
- Green bases have known domain annotations that are detailed below.
Rat 7 YTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGK-------DLEYRLDPKTSELPHLRN 64
Rat 65 PDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSG 129
Rat 130 QNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGS-------- 186
Rat 187 --------------------------------------------ASEANVEEKVLASNPIMESIG 207
Rat 208 NAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAKLP 272
Rat 273 EFKMLRLGNADSFHYTKQGGSPMIEGVDDAKEMAHTRQACTLLGISESYQMGIFRILAGILHLGN 337
Rat 338 VGF-ASRDSDSCTIPPKHEPLIIFCDLMGVDYEEMCHWLCHRKLATATETYIKPISKLQATNARD 401
Rat 402 ALAKHIYAKLFNWIVGHVNQALHSAVKQ-HSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQF 465
Rat 466 NMHVFKLEQEEYMKEQIPWTLIDF-YDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYN 529
Rat 530 THLNKCALFEKPRMSNKA-FIIKHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQ 593
Rat 594 DDE---KAISPTSATSSGRTPLTRVPVKPTKGRPGQTAKEHKKTVGLQFRNSLHLLMETLNATTP 655
Rat 656 HYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL 720
Rat 721 G--DRKQTCQNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGWLLR 783
Rat 784 KRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAATTIQKYWRMYVVRRKYKIRRAATIVLQSYL 848
Rat 849 RGYLARNRYRKILREHKAVIIQKRVRGWL------ARTHYKRTMKAIIYLQCCFRRMMAKRELKK 907
Rat 908 LKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTNLEGVYNSETEKLRNDVERL- 971
Rat 972 -QLSEEEA---KVATGRVLSLQEEIAKLRKDL-------EQTRSEKKSIEERADKYKQ---ETEQ 1022
Rat 1023 LVSNL-----KEENTLLKQEKETLNHLMVEQAKEMTETMERKLVEETKQLELDLNDERLRYQNLL 1082
Rat 1083 NEFSRLEERYDDLKEEMT-LMLNVPKPGHKRTDSTHSSNESEYTFSSEFAE-TEDI-APRTEEPT 1144
Rat 1145 EKKVPLDMSLFLKLQKRVTELEQEKQLMQDELD-----------RKEEQVLRSKAKEEERPQIRG 1198
Rat 1199 AELEYESLKRQELESENKKLKNELNELRKA--LSEKSAPEVTAPGAPAYRVLMEQLTAVSE---- 1257
Rat 1258 -------------ELDVRKEEVLILRSQLVSQKEAIQPKDDKNTMTDSTILLEDVQKMKDKGEIA 1309
Rat 1310 QAYIGLKETNRSSAMDYQELNEDGELWLVYEGLKQANRLLESQ------LQSQKRSHENEAEALR 1368
Rat 1369 GEIQSLKEENNRQQQLLA----QNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPKKYQSY 1429
Rat 1430 RISLYKRMI-DLMEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPR 1493
Rat 1494 KEKDFQGML-EYKREDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSL 1557
Rat 1558 LTSTINSIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCL------- 1615
Rat 1616 ---------TNFDLAEYRQVLSD--LAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGV--K 1667
Rat 1668 PTGLRKRTSSIADEGTYTLDSILRQLNSFHSVMCQHGMDPELIKQVVKQMFYIVGAITLNNLLLR 1732
Rat 1733 KDMCSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKETLEPL-------IQA--AQLLQV------- 1781
Rat 1782 -------KKKTDDDAEAICSMCNALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQVRLRDRKDS 1839
Rat 1840 PQLLMD 1845 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Myo5a | XP_038936774.1 | COG5022 | 7..1275 | CDD:227355 | 429/1394 (31%) |
MYSc_Myo5 | 83..751 | CDD:276831 | 271/728 (37%) | ||
Smc | 1157..>1484 | CDD:224117 | 82/367 (22%) | ||
Myo5a_CBD | 1506..1880 | CDD:271262 | 71/383 (19%) | ||
zip | NP_523860.2 | Myosin_N | 80..117 | CDD:280832 | 10/38 (26%) |
Myosin_head | 133..854 | CDD:278492 | 275/752 (37%) | ||
MYSc_Myh2_insects_mollusks | 145..854 | CDD:276876 | 271/728 (37%) | ||
Myosin_tail_1 | 931..2011 | CDD:279860 | 236/1117 (21%) | ||
Prefoldin | 1431..1515 | CDD:298833 | 19/101 (19%) | ||
FAM76 | <1847..1926 | CDD:292665 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |