Sequence 1: | XP_038936774.1 | Gene: | Myo5a / 25017 | RGDID: | 3143 | Length: | 1880 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285949.1 | Gene: | ck / 34882 | FlyBaseID: | FBgn0000317 | Length: | 2167 | Species: | Drosophila melanogaster |
Alignment Length: | 2256 | Identity: | 578/2256 - (25%) |
---|---|---|---|
Similarity: | 904/2256 - (40%) | Gaps: | 618/2256 - (27%) |
- Green bases have known domain annotations that are detailed below.
Rat 17 DPEEVWKSAELLKDYKPGDKVLLLHLEEGKDLEYRLDPKTSELPHLRNPDILVGENDLTALSYLH 81
Rat 82 EPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEA 146
Rat 147 YKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKT 211
Rat 212 TRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKM 276
Rat 277 LRLGNADSFHYTKQGGSPMIEGVDDAKEMAHTRQACTLLGISESYQMGIFRILAGILHLGNVGFA 341
Rat 342 SR--DSDSCTIPPKHEPLIIFCDLMGVDYEEMCHWLCHRKLATATETYIKPISKLQATNARDALA 404
Rat 405 KHIYAKLFNWIVGHVNQALHS-AVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMH 468
Rat 469 VFKLEQEEYMKEQIPWTLIDFYDNQPCINLIESK-LGILDLLDEECKMPKGTDDTWAQKLYNTHL 532
Rat 533 NKCALFEKPRMS-NKAFIIKHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDE 596
Rat 597 KAISPTSATSSGRTPLTRVPVKPTKGRPGQTAKEHKKTVGLQFRNSLHLLMETLNATTPHYVRCI 661
Rat 662 KPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLGDRKQT 726
Rat 727 CQNVLEKL---ILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGWLLRKRYLC 788
Rat 789 MQRAAITVQRYVRGYQARCYAKFLRRTKAATTIQKYWRMYVVRRKYKIRRAATIVLQSYLRGYLA 853
Rat 854 RNRYRKILREHKAVIIQKRVRGWLARTHYKRTMKAIIYLQCCFRRMMAKRELKKLKIE------- 911
Rat 912 --ARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTNLEGVYNSETEKLR--------- 965
Rat 966 NDVERLQLSEEEAKVATGRVLSLQEEI----------------AKLRKDLEQTRSEKKSIEERAD 1014
Rat 1015 KYKQETEQLVSNLKEENTLLKQEKETLNHLMVEQAKEMTETMERKLVEETKQLELDLNDERLRYQ 1079
Rat 1080 NLLNEFSRLEERYDDLKEEMTLMLNVPKPGH---KRTDSTHSSNESEYTFSSEFAETEDIAPRTE 1141
Rat 1142 EPTEKK-VPLDMSLFLKLQKRVTE-------LEQEKQLMQDELDRKEEQVLRSKAKE---EERPQ 1195
Rat 1196 IRGAELEY---ESLKRQELESE-----NKKLKNELNELRK----------------ALSEKSAPE 1236
Rat 1237 VTA---PGAPAYRVLMEQLTAVSEELDVRKEEVLILRSQLVSQKEAIQ-PKD--DKNTMT----D 1291
Rat 1292 STILLEDVQKMKDKGEIA-----QAYIGL--KETNRSSAMDYQELNEDGELWLVYEGLKQANRLL 1349
Rat 1350 ESQLQSQKR-------------------SHENEA------EALR----GEIQSLKEENNRQQQLL 1385
Rat 1386 AQNLQLPPEARIEASLQHEITRLTN---------------------ENLYFEELYADD---PKK- 1425
Rat 1426 -------------------YQSYRIS-----------------LYKRMIDLMEQL---------- 1444
Rat 1445 ----EKQDK---------TVR-----------------------KLKKQLKV------------- 1460
Rat 1461 -----FAKKIGELEVGQMENISPGQII-----------------DEPIRPVNI-PRKEKDFQGML 1502
Rat 1503 EYKREDEQKLVKNLIL-----ELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTI 1562
Rat 1563 NS-------------IKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGE--------------- 1599
Rat 1600 --EGFMKHNTSRQNEHCLTNFDLAEYRQVLSD--------LAIQIYQQLVRVLENILQPMIVSGM 1654
Rat 1655 LEHETIQGVSGVKPTGLRKRTSSIADEGTYTLDSILRQLNSFHSVMCQHGMDPELIKQVVKQMFY 1719
Rat 1720 IV-------GAITLNNLLLRKDMC-SWSKGMQIRYN-------------------------VSQL 1751
Rat 1752 EEWLRDKNLMNSGAK--------------------------------ETLEPLIQ---------- 1774
Rat 1775 ---AAQLLQVK-KKTDDDAEAICSMCNALTTAQIVKV-------LNLYTPVNE----FEERVSVS 1824
Rat 1825 FIRTI-----------QVRLRDRKDSPQLLMDA--KH----IFPVT 1853 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Myo5a | XP_038936774.1 | COG5022 | 7..1275 | CDD:227355 | 427/1340 (32%) |
MYSc_Myo5 | 83..751 | CDD:276831 | 284/675 (42%) | ||
Smc | 1157..>1484 | CDD:224117 | 96/548 (18%) | ||
Myo5a_CBD | 1506..1880 | CDD:271262 | 78/498 (16%) | ||
ck | NP_001285949.1 | MYSc | 64..733 | CDD:214580 | 292/700 (42%) |
MYSc_Myo7 | 77..721 | CDD:276832 | 284/675 (42%) | ||
MyTH4 | <1138..1245 | CDD:214535 | 24/108 (22%) | ||
B41 | 1251..1467 | CDD:214604 | 40/231 (17%) | ||
FERM_B-lobe | 1355..1439 | CDD:271216 | 16/87 (18%) | ||
FERM_C1_MyoVII | 1461..1559 | CDD:270019 | 15/99 (15%) | ||
SH3 | 1560..1624 | CDD:302595 | 11/67 (16%) | ||
MyTH4 | 1701..1849 | CDD:214535 | 26/175 (15%) | ||
B41 | 1856..2068 | CDD:214604 | 28/211 (13%) | ||
FERM_M | 1966..2068 | CDD:278785 | 15/101 (15%) | ||
FERM_C2_MyoVII | 2064..2159 | CDD:270020 | 10/35 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100101 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |