Protein Alignment Vars1 and GstD3

DIOPT Version :9

• Sequence 1: NP_445744.1
• Gene: Vars1 / 25009
• RGDID: 3950
• Length: 1264
• Species: Rattus norvegicus
• Sequence 2: NP_788656.1
• Gene: GstD3 / 48336
• FlyBaseID: FBgn0010039
• Length: 199
• Species: Drosophila melanogaster
• Alignment Length: 214
• Identity: 51/214 - (23%)
• Similarity: 78/214 - (36%)
• Gaps: 60/214 - (28%)

  Rat    53 PPPRLPALEQGPGGLWVWGAPAVA----------QLLWPAGLGGPGGSRAAVLVQQWVSYADTEL 107
            |...:|.|..  .|..:|.:.|:.          ..|:|..:     .:.||:.|:  .|.|..|
  Fly    32 PQHSIPTLVD--NGFTIWESRAILVYLVEKYGKDDALYPKDI-----QKQAVINQR--LYFDMAL 87

  Rat   108 T-PAACGATLPAL--GLRGPGQDPQAALGALGKALNPLEEWLRLHTYLAGDAPTLADLAAVTALL 169
            . |........|.  |..|..:|.:    .:.:..:.|..:|....|:|||..|:||: |:.|.:
  Fly    88 MYPTLANYYYKAFTTGQFGSEEDYK----KVQETFDFLNTFLEGQDYVAGDQYTVADI-AILANV 147

  Rat   170 LPFRYV-LDPSARRIWGNVTRWFNTCVRQPEFRAVLGEVVLYSGARSVTQQPGSEITAPQKTAAQ 233
            ..|..| .|.|.   :.||.||                   |...:.:|  ||.|    :..|..
  Fly   148 SNFDVVGFDISK---YPNVARW-------------------YDHVKKIT--PGWE----ENWAGA 184

  Rat   234 LKKEAKKREKLEKFQQKQK 252
            |  :.|||  :|:.|...|
  Fly   185 L--DVKKR--IEEKQNAAK 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vars1	NP_445744.1	GstA	<56..203	CDD:223698	37/160 (23%)
		GST_C_family	92..213	CDD:295467	31/124 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	218..296		11/35 (31%)
		PTZ00419	282..1264	CDD:240411
		ValRS_core	335..938	CDD:185677
		'HIGH' region	344..354
		tRNA-synt_1_2	513..640	CDD:290334
		'KMSKS' region	862..866
		Anticodon_Ia_Val	938..1075	CDD:153416
		Val_tRNA-synt_C	1196..1258	CDD:287436
GstD3	NP_788656.1	GST_N_Delta_Epsilon	<1..58	CDD:239343	6/27 (22%)
		GstA	6..173	CDD:223698	39/176 (22%)
		GST_C_Delta_Epsilon	72..188	CDD:198287	37/152 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0625
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810