DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABL1 and abl1

DIOPT Version :9

Sequence 1:NP_009297.2 Gene:ABL1 / 25 HGNCID:76 Length:1149 Species:Homo sapiens
Sequence 2:XP_005172104.1 Gene:abl1 / 100000720 ZFINID:ZDB-GENE-100812-9 Length:1081 Species:Danio rerio


Alignment Length:1169 Identity:808/1169 - (69%)
Similarity:893/1169 - (76%) Gaps:108/1169 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGQQPGKVLGDQRRPSLPALHFIKGAGKKESSRHGGPHCNVFVEHEALQRPVASDFEPQGLSEAA 65
            |||||||::|:|||||||||.|||.||::|:.|||.||||||..||:  ||   ||:|.||||||
Zfish     1 MGQQPGKLVGEQRRPSLPALPFIKAAGRRETPRHGAPHCNVFTVHES--RP---DFDPPGLSEAA 60

Human    66 RWNSKENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWV 130
            |||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish    61 RWNSKENLLSGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWV 125

Human   131 PSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRI 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   126 PSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRI 190

Human   196 NTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKPTVYGVSPNYDKWEMERTD 260
            |||||||||||||||||||||||||||||:||||||||||||||||||:||||||||||||||||
Zfish   191 NTASDGKLYVSSESRFNTLAELVHHHSTVSDGLITTLHYPAPKRNKPTIYGVSPNYDKWEMERTD 255

Human   261 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   256 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 320

Human   326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 390
            |||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   321 REPPFYIITEFMTHGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 385

Human   391 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 455
            |||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   386 GENNLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 450

Human   456 MSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 520
            ||||||||||||||||||||||:|||||||||||||||||:|||::||||||.||||||||||||
Zfish   451 MSPYPGIDLSQVYELLEKDYRMDRPEGCPEKVYELMRACWRWNPAERPSFAETHQAFETMFQESS 515

Human   521 ISDEVEKELGKQGVRGAVSTLLQAPELPTKTRTSRRAAEHRDTTDVPEMPHSKGQGES-DPLDHE 584
            |||||||||||:|.:..:..:.|||||||||||.||..:.||             |:| |..:.|
Zfish   516 ISDEVEKELGKKGKKLTLGPIQQAPELPTKTRTLRRPTDGRD-------------GDSPDAAEAE 567

Human   585 PAVSPLLPRKERGPP--EGGLNEDERLLPKDKK----TNLFSALIKKKKKTAPTPPKRSSSFREM 643
            ....|::||     |  :..||||:||..||.|    .|.|| .|||||:|||.||||||||.:|
Zfish   568 VTGPPMMPR-----PLLDSNLNEDDRLQSKDNKDKFRMNPFS-YIKKKKRTAPAPPKRSSSFGKM 626

Human   644 DGQPERRGAGEEEGRDISNGALAFTPLDTADPAK--SPKPSNGAGVPNGALRESGGSGFRSPHLW 706
            ||..:|||.|.:...|.|||:.....|::.||.|  ....:...||.||| ....|..|.| |..
Zfish   627 DGHLDRRGLGTDCREDFSNGSSTNDALNSIDPCKLVGSNSTTTIGVTNGA-PVYPGQLFPS-HPR 689

Human   707 KKSSTL-TSSRLAT--GEEEGGGSSSKRFLRSCSASCVPHGAKDTEWRSVTLPRDLQSTGRQFDS 768
            ||.:|. ...:|||  ..||...|:|||||||.|:|.:|.|:...||:|||||||:|||  .|||
Zfish   690 KKGTTSGGGGKLATTPPPEEDSMSNSKRFLRSSSSSSMPPGSDRFEWKSVTLPRDIQST--HFDS 752

Human   769 STFGGHKSEKPALPRKRAGENRSDQVTRGTVTPPPRLVKKNEEAADEVFKDIMESSPGSSPPNLT 833
            :||.|    |||||||      |.....||:||||||.||:|:.:|||||| .||||||||..||
Zfish   753 NTFRG----KPALPRK------SCMPRGGTLTPPPRLPKKSEDVSDEVFKD-SESSPGSSPLTLT 806

Human   834 PKPLRRQVTVAPASGLPHKEEAGKGSALGTPAAAEPVTPTSKAGSGAPGGTSKGPAEESRVRRHK 898
            ||..||..|           |:.|.|||.|......|.|        |.|      :|.|.||.|
Zfish   807 PKLGRRPQT-----------ESSKTSALQTEVLKPNVLP--------PLG------DEGRPRRLK 846

Human   899 HSSESPG---RDKGKLSRLKPAPPPPPAASAGKAGGKPSQSPSQEAAGEAVLGAKTKATSLVDAV 960
            .|||.||   |:|||.::.||||||||.:||  ..||.|:||:.|.:.:      ||..|.:|  
Zfish   847 LSSEIPGQREREKGKFAKPKPAPPPPPVSSA--KSGKTSRSPTFEVSSD------TKVKSSLD-- 901

Human   961 NSDAAKPSQPGEGLKKPVLPATPKPQSAKPSGTPISPAPVPSTLP---SASSALAGDQPSSTAFI 1022
            ::|..|.|...|..||     .||      :|:.::|:...:|.|   ..:|.:.||..||  ||
Zfish   902 SADQGKASLSQESAKK-----LPK------NGSKVNPSKAGATAPLPGMGASPVVGDPGSS--FI 953

Human  1023 PLISTRVSLRK--TRQPPERIASGAITKGVVLDSTEALCLAISRNSEQMASHSAVLEAGKNLYTF 1085
            ||::||.||||  .|||.||::|..||:.::|:|:|.|..||:|.|||..||||||||||||..:
Zfish   954 PLMTTRRSLRKAPARQPSERLSSSTITRDMLLESSELLRTAIARVSEQTGSHSAVLEAGKNLSKY 1018

Human  1086 CVSYVDSIQQMRNKFAFREAINKLENNLRELQICPATAGSGPAATQDFSKLLSSVKEISDIVQR 1149
            |||||:|||||||||||||||||||::|||||||||..|:. ...|||||||.|||||||||||
Zfish  1019 CVSYVESIQQMRNKFAFREAINKLESSLRELQICPAATGTA-NTPQDFSKLLCSVKEISDIVQR 1081

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABL1NP_009297.2 SH3_Abl 84..137 CDD:212784 52/52 (100%)
SH2_ABL 142..235 CDD:198189 91/92 (99%)
PTKc_Abl 254..516 CDD:270645 254/261 (97%)
Pkinase_Tyr 261..512 CDD:285015 243/250 (97%)
FABD 1025..1149 CDD:197885 86/125 (69%)
abl1XP_005172104.1 SH3_Abl 79..132 CDD:212784 52/52 (100%)
SH2_ABL 137..230 CDD:198189 91/92 (99%)
PTKc_Abl 249..511 CDD:270645 254/261 (97%)
Pkinase_Tyr 256..507 CDD:285015 243/250 (97%)
FABD 958..1081 CDD:197885 86/123 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194338059
Domainoid 1 1.000 508 1.000 Domainoid score I2658
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3783
Inparanoid 1 1.050 1380 1.000 Inparanoid score I1170
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG42186
OrthoDB 1 1.010 - - D102126at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 1 1.000 - - oto51860
orthoMCL 1 0.900 - - OOG6_100013
Panther 1 1.100 - - LDO PTHR24418
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X88
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 1 1.500 - -
1515.410

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