DRSC/TRiP Functional Genomics Resources

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Protein Alignment hoe1 and ybiR

DIOPT Version :10

Sequence 1:NP_608876.1 Gene:hoe1 / 249663 FlyBaseID:FBgn0041150 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_415339.1 Gene:ybiR / 945438 ECOCYCID:G6421 Length:372 Species:Escherichia coli


Alignment Length:457 Identity:103/457 - (22%)
Similarity:181/457 - (39%) Gaps:142/457 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 IDVETLLLLFGMMILVAILSETGVFDYLA---VYAYKITNGHVWPLINCLCLFTAVLSSFLDNVT 455
            ||..|::.|.|:|:|...:..:|.||.|.   |..:....    .|...:.|..|:||:||.|..
E. coli    40 IDWHTIITLSGLMLLTKGVELSGYFDVLGRKMVRRFATER----RLAMFMVLAAALLSTFLTNDV 100

  Fly   456 TVLLMTPVTI---RLCEVMCLNPVPILMCMVIYSNIGGALTPVGDPPNVIIASNSYISKNGVNFA 517
            .:.::.|:||   ||||:. :|.:.|...:.:  |.|..|||:|:|.|::|...|     |::||
E. coli   101 ALFIVVPLTITLKRLCEIP-VNRLIIFEALAV--NAGSLLTPIGNPQNILIWGRS-----GLSFA 157

  Fly   518 VFTLHMLP--GVLLVMVQTYIQLRFKFRNISDLQFKDSPEVEELRHEIHVWKRAAASLSAYSKDE 580
            .|...|.|  |.:::.:.......|..:   .:|:....:..|.:..: ||    :.|..|    
E. coli   158 GFIAQMAPLAGAMMLTLLLLCWCCFPGK---AMQYHTGVQTPEWKPRL-VW----SCLGLY---- 210

  Fly   581 ELVRQTLMKKVNRLKRSLKKRMTAVIEPAPNYQQTLANLQAKYPIRNKPLLIKCSAALVFVISLF 645
                                                                     :||:.:|.
E. coli   211 ---------------------------------------------------------IVFLTALE 218

  Fly   646 FLHSVPELQRLSLGWTALLGAIFLIILADIEDMEAILARVEWSTLLFFAALFILMEALTELGLIE 710
            |...:         |..::.|....:||     ..::..|:|:.||.|.|:||.:..||:|..::
E. coli   219 FKQEL---------WGLVIVAAGFALLA-----RRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQ 269

  Fly   711 WI-GNMTEGIILGVGEDRRLMVAILIILWVSAVA-SAFVDNIPLTTMMVKITISLAQNSTLNL-- 771
            .: ||::.....|              ||::|:. |..:.|:|.|.::            ||.  
E. coli   270 GVLGNVSHLSEPG--------------LWLTAIGLSQVISNVPSTILL------------LNYVP 308

  Fly   772 PLQPLVWALALGACLGGNGTLIGASANVVCAGVAEQHGYKFTFLQFFKVGFPIMIGSIIVTTGYL 836
            |...||||:.    :||.|.|.|:.||::...:|..   :..:.:|.....|:::.:.:|  ||:
E. coli   309 PSLLLVWAVN----VGGFGLLPGSLANLIALRMAND---RRIWWRFHLYSIPMLLWAALV--GYV 364

  Fly   837 LV 838
            |:
E. coli   365 LL 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hoe1NP_608876.1 geminin-like_CC 68..>118 CDD:459243
P_permease 349..837 CDD:238536 102/454 (22%)
ybiRNP_415339.1 YbiR_permease 8..366 CDD:238537 102/455 (22%)
Blue background indicates that the domain is not in the aligned region.

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