DRSC/TRiP Functional Genomics Resources

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Protein Alignment hoe1 and nhaB

DIOPT Version :10

Sequence 1:NP_608876.1 Gene:hoe1 / 249663 FlyBaseID:FBgn0041150 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_415704.1 Gene:nhaB / 944822 ECOCYCID:EG11392 Length:513 Species:Escherichia coli


Alignment Length:450 Identity:82/450 - (18%)
Similarity:175/450 - (38%) Gaps:134/450 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 VGILAALNSRPSMATIMGWIDVETLLLLFGMMILVAILSETGVFDY----LAVYAYKITNGHVWP 435
            :|:.:|.:.|..:|.     ::|.||||..|:..:..:.:..:|.:    |::.:..:       
E. coli    77 IGMTSAEHVREEVAA-----NLEVLLLLMFMVAGIYFMKQLLLFIFTRLLLSIRSKML------- 129

  Fly   436 LINCLCLFTAVLSSFLDNVTTVLLMTPVTI--------------------------RLCEVMCLN 474
            |....|:..|.||:|||.:|.|.::..|.:                          :..:|:...
E. coli   130 LSLSFCVAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQ 194

  Fly   475 PVPILMCMVIYSNI----GGALTPVGDPPNVIIASNSYISKNGVNFAVFTLHMLPGVLLVMVQTY 535
            ....|..:::::.:    ||.:|.||:|.|:|||..:     |.:|..|.|.|.|..:.|::...
E. coli   195 FRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAA-----GWHFGDFFLRMSPVTVPVLICGL 254

  Fly   536 IQLRFKFRNISDLQFKDSPEVEELRHEIHVWKRAAASLSAYSKDEELVRQTLMK--KVNRLKRSL 598
            :....               ||:||     |.....:|      .|.||:.|.:  ..:|.:|:.
E. coli   255 LTCLL---------------VEKLR-----WFGYGETL------PEKVREVLQQFDDQSRHQRTR 293

  Fly   599 KKRMTAVIEPAPNYQQTLANLQAKYPIRNKPLLIKCSAALVFVISLFFL----------HSVPEL 653
            :.::..:::.........|            |.:..:...:..:|:..|          |::.:.
E. coli   294 QDKIRLIVQAIIGVWLVTA------------LALHLAEVGLIGLSVIILATSLTGVTDEHAIGKA 346

  Fly   654 QRLSLGWTALLGAIFLIILADIED------MEAILARVEWSTLLFFAALFILMEALTELGLIEWI 712
            ...||.:||||...|.::...|:.      ::.:|...|.:.|    :||.:...|        :
E. coli   347 FTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQL----SLFYIFNGL--------L 399

  Fly   713 GNMTEGIILGVGEDRRLMVAILIILWVSAVASAFVDNIPLTTMMVKITISLAQNSTLNLP 772
            .::::.:.:|.             ::::. |.|.:::..:|....:: :::|.|:..|||
E. coli   400 SSISDNVFVGT-------------IYINE-AKAAMESGAITLKQYEL-LAVAINTGTNLP 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hoe1NP_608876.1 geminin-like_CC 68..>118 CDD:459243
P_permease 349..837 CDD:238536 81/449 (18%)
nhaBNP_415704.1 nhaB 1..510 CDD:181942 81/449 (18%)
Blue background indicates that the domain is not in the aligned region.

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