DRSC/TRiP Functional Genomics Resources

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Protein Alignment hoe1 and NHD2

DIOPT Version :10

Sequence 1:NP_608876.1 Gene:hoe1 / 249663 FlyBaseID:FBgn0041150 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_175403.1 Gene:NHD2 / 841404 AraportID:AT1G49810 Length:420 Species:Arabidopsis thaliana


Alignment Length:516 Identity:117/516 - (22%)
Similarity:191/516 - (37%) Gaps:167/516 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 AVLCGL-YVMIIWEIVNRTFAAIIASTLSVGILAALNSRPSMATIMGWIDVETLLL--------- 401
            |:|.|: ||:||:|      .::..|...:.:|.|: |...:.:|...:::.||.|         
plant     2 ALLFGIGYVLIIFE------ESLSFSKSGIALLMAV-SLWVVRSIETSVEIVTLELQHATSEVSQ 59

  Fly   402 ----LFGMMILVAILSETGVFDYLAVYAYK-----ITNGHVWPLINCLCLFTAVLSSFLDNVTTV 457
                :.|.|.:|.|:.        |...:|     ||:.....|:..:...|..|||.|||:|:.
plant    60 IVFYMLGAMTIVEIID--------AHQGFKLVTDCITSRKPKILLWVIGFATFFLSSVLDNLTST 116

  Fly   458 LLMTPVTIRLCEVMCLNPVP-------ILMCMVIYSNIGGALTPVGDPPNVIIASNSYISKNGVN 515
            ::|..:..||        :|       :...:||.:|.|||.||:||....::..:.:||    .
plant   117 IVMVSLLRRL--------IPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGHIS----T 169

  Fly   516 FAVFTLHMLPGVLLVMVQTYIQLRFKFRNISDLQFKDSPEVEELRHEIHVW--KRAAASLSAYSK 578
            |:......||..:.::|...:.                    .|..|:|..  ......|.||.:
plant   170 FSTIKNLFLPSAISLVVPLALM--------------------SLTSEVHGMGLNTPPTPLLAYDR 214

  Fly   579 DEELVRQTLMKKVNRLKRSLKKRMTAVIEPAPNYQQTLANLQAKYPIRNKPLLIKCSAALVFVIS 643
            .                             ||               |.|.:......||:||..
plant   215 S-----------------------------AP---------------RGKLVFGVGFGALLFVPL 235

  Fly   644 LFFLHSVPELQRLSLGWTALLGAIFLIILADI---EDMEA-------ILARVEWSTLLFFAALFI 698
            ...|..:|....:.||    ||.|:  ||.|:   .|:|.       .|:|::....|||..:.:
plant   236 FKSLTGLPPYMGILLG----LGVIW--ILTDVIHYGDLERQHLKLPHALSRIDSQGALFFLGILL 294

  Fly   699 LMEALTELGLIEWIGNMTEGIILGVGEDRRLMVAILIILWVSAVASAFVDNIPLTTMMVKITISL 763
            .|.:|...|:::.|.|..:..|..|    .|:.:|:      .|.||.:||:||    |..|:.:
plant   295 SMSSLDAAGILKVIANYLDAHIANV----ELIASII------GVVSAIIDNVPL----VAATMGM 345

  Fly   764 AQNSTLNLPLQPLVWALALGACLGGNGTLI--GASANVVCAGVAEQHGYKFTFLQFFKVGF 822
            ...||  .|.....|.| :..|.|..|:::  |::|.|:             |:...||.|
plant   346 YDLST--FPQDSEFWQL-ISFCAGTGGSMLITGSAAGVI-------------FMSMEKVNF 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hoe1NP_608876.1 geminin-like_CC 68..>118 CDD:459243
P_permease 349..837 CDD:238536 116/514 (23%)
NHD2NP_175403.1 PLN00137 1..418 CDD:215071 117/516 (23%)
Blue background indicates that the domain is not in the aligned region.

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