DRSC/TRiP Functional Genomics Resources

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Protein Alignment hoe1 and NHD1

DIOPT Version :10

Sequence 1:NP_608876.1 Gene:hoe1 / 249663 FlyBaseID:FBgn0041150 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_566638.1 Gene:NHD1 / 821483 AraportID:AT3G19490 Length:576 Species:Arabidopsis thaliana


Alignment Length:714 Identity:156/714 - (21%)
Similarity:249/714 - (34%) Gaps:237/714 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 QLSLISVPRNSSPRVFPIATASLQRIGL----GLRGPFRLQENELAINASVPLPLLQVQVMRSYF 257
            ||:...|...|||  ..|:|...|.:..    |:.|..||.::.:.:.|                
plant    15 QLTKRHVIATSSP--ISISTRLPQNVSFSKVSGVTGSTRLSKHGVLVRA---------------- 61

  Fly   258 DGEGMEIYIENASQVWQLD-VVYPDLIDATRDTKKQRTFELSPTDPLWLAQANRTELSFEFTSSI 321
                 |..|.::|....|| .:..||:|::           ...|||         .|.:..||.
plant    62 -----EDKIRSSSSPSSLDEPIDEDLMDSS-----------GLCDPL---------CSVDEPSSS 101

  Fly   322 EGELPLQLNVDESPIYKRDGVIYAA--------------------AVLCGL-YVMIIWEIVNRTF 365
            ..|...|...|   |.|...::.||                    |:|.|: |..||:|      
plant   102 YFEANYQPKTD---IIKALAILAAALTGTAAINHSWVAANQDVAMALLFGIGYAGIIFE------ 157

  Fly   366 AAIIASTLSVGILAALN-----SRPSMATIMGWIDV--------ETLLLLFGMMILVAILSETGV 417
            .::..:...:|:|.|::     |..:.:|.:..:|:        |.:..|.|.|.:|.|:.    
plant   158 ESLAFNKSGIGLLMAVSLWVVRSIGAPSTEIAVLDLQHATAEVSEIVFFLLGAMTIVEIVD---- 218

  Fly   418 FDYLAVYAYKITNGHVW-----PLINCLCLFTAVLSSFLDNVTTVLLMTPVTIRLCEVMCLNPVP 477
                |...:|:...::.     .|:..:...|..|||.|||:|:.::|..:..:|        ||
plant   219 ----AHQGFKLVTDNITTRKPKTLLWVVGFVTFFLSSILDNLTSTIVMVSLIRKL--------VP 271

  Fly   478 -------ILMCMVIYSNIGGALTPVGDPPNVIIASNSYISKNGVNFAVFTLHMLPGVLLVMVQTY 535
                   :...:||.:|.|||.||:||....::..:..||         ||..:..:.|      
plant   272 QSEYRKLLGGVVVIAANAGGAWTPIGDVTTTMLWIHGQIS---------TLPTMKDLFL------ 321

  Fly   536 IQLRFKFRNISDLQFKDSPEVEELRHEIHVWKRAAASLSAYSKDEELVRQTLMKKVNRLKRSLKK 600
                              |.|..|          |..|:..|         |..:||. |....|
plant   322 ------------------PSVVSL----------AVPLALMS---------LTSEVNG-KEQDPK 348

  Fly   601 RMTAVIEPAPNYQQTLANLQAKYPIRNKPLLIKCSAALVFVISLFFLHSVPELQRLSLGWTALLG 665
            .:.|..:.||               |.|.:......|||||.....|..:|....:.||    ||
plant   349 DVLASEKMAP---------------RGKLVFGVGLGALVFVPVFKALTGLPPYMGILLG----LG 394

  Fly   666 AIFLIILADIEDMEAI---------------LARVEWSTLLFFAALFILMEALTELGLIEWIGNM 715
            .::::       .:||               |:|::....|||..:.:.:.:|...|::..|.|.
plant   395 VLWIL-------TDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANY 452

  Fly   716 TEGIILGVGEDRRLMVAILIILWVSAVASAFVDNIPLTTMMVKITISLAQNSTLNLPLQPLVWAL 780
            .:..|..|.     ::|..|     .|.||.:||:||      :..::......:.|.....|.|
plant   453 LDANIPNVE-----LIASAI-----GVVSAIIDNVPL------VAATMGMYDLTSFPQDSEFWQL 501

  Fly   781 -ALGACLGGNGTLIGASANVVCAGVAEQHGYKFTFLQFF-KVGFPIMIGSIIVTTGYLLVSHSL 842
             |..|..||:..:||::|.|...|:.     |..|..:| ||......|.......||.| |:|
plant   502 IAFCAGTGGSMLVIGSAAGVAFMGME-----KVDFFWYFRKVSGFAFAGYAAGIAAYLAV-HNL 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hoe1NP_608876.1 geminin-like_CC 68..>118 CDD:459243
P_permease 349..837 CDD:238536 116/530 (22%)
NHD1NP_566638.1 PLN00137 136..559 CDD:215071 120/545 (22%)
Blue background indicates that the domain is not in the aligned region.

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