DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hoe1 and Indy

DIOPT Version :9

Sequence 1:NP_001285607.1 Gene:hoe1 / 249663 FlyBaseID:FBgn0041150 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_730363.2 Gene:Indy / 40049 FlyBaseID:FBgn0036816 Length:590 Species:Drosophila melanogaster


Alignment Length:594 Identity:105/594 - (17%)
Similarity:207/594 - (34%) Gaps:188/594 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 ELPLQLNVDESP-----------IYKRDGVIYAAAVLC-------------GLYVMIIWEIVNRT 364
            ::.:::.:.|.|           .:.:..|::...:||             .:|::::..|...|
  Fly    16 DIKMEIEIGEQPQPPVKCSNFFANHWKGLVVFLVPLLCLPVMLLNEGAEFRCMYLLLVMAIFWVT 80

  Fly   365 FAAIIASTLSVGILAALNSRPSMATIMGWIDVETLLLLFGMMILVAILSETGVFDYLAVYAYKIT 429
            .|..:..|..:.|:|        ..|||.:..:....|:....||..:.  |:...|||   :..
  Fly    81 EALPLYVTSMIPIVA--------FPIMGIMSSDQTCRLYFKDTLVMFMG--GIMVALAV---EYC 132

  Fly   430 NGH------VWPLINC--------LCLFTAVLSSFLDNVTTVLLMTPVTIRLCE------VMCLN 474
            |.|      |..::.|        |.:.|..||.::.|.....:|.|:...:.|      |..:|
  Fly   133 NLHKRLALRVIQIVGCSPRRLHFGLIMVTMFLSMWISNAACTAMMCPIIQAVLEELQAQGVCKIN 197

  Fly   475 ---------------------PVPILMCM---VIY-SNIGGALTPVGDPPNV----IIASNSYIS 510
                                 |..|.:|.   :.| |::||..|.:|...|:    |..:....|
  Fly   198 HEPQYQIVGGNKKNNEDEPPYPTKITLCYYLGIAYASSLGGCGTIIGTATNLTFKGIYEARFKNS 262

  Fly   511 KNGVNFAVFTLHMLPGVLLVMVQTYIQLRFKFRNISDLQFKDSPEVEELRHEIHVWKRAAASLSA 575
            ...::|..|..:.:|.:|:..:.|::.|::.|..:...:.|::.||:..|....|.|:.   :..
  Fly   263 TEQMDFPTFMFYSVPSMLVYTLLTFVFLQWHFMGLWRPKSKEAQEVQRGREGADVAKKV---IDQ 324

  Fly   576 YSKDEELVRQTLMKKVNRLKRSLKKRMTAVIEPAPNYQQTLANLQAKYPIRNKPLLIKCSAALVF 640
            ..||                          :.|...::                  |:.....:|
  Fly   325 RYKD--------------------------LGPMSIHE------------------IQVMILFIF 345

  Fly   641 VISLFFLHSVPELQRLSLGWTALLGA---------IFLIILA----------------------- 673
            ::.::|...    ..:.|||..||.:         ||::::.                       
  Fly   346 MVVMYFTRK----PGIFLGWADLLNSKDIRNSMPTIFVVVMCFMLPANYAFLRYCTRRGGPVPTG 406

  Fly   674 ---DIEDMEAILARVEWSTLLFFAALFILMEALTELGLIEWIGNMTEGIILGVGEDRRLM---VA 732
               .:...:.|..:|.|..:......|.|.|...:.|:.:.|||...|:        :::   |.
  Fly   407 PTPSLITWKFIQTKVPWGLVFLLGGGFALAEGSKQSGMAKLIGNALIGL--------KVLPNSVL 463

  Fly   733 ILIILWVSAVASAFVDNIPLTTMMVKITISLAQNSTLNLPLQPLVWALALG-ACLGGNGTLIGAS 796
            :|:::.|:...:||..|:.:..:::.:   ||:.| |.:.:.||...|..| ||.......:...
  Fly   464 LLVVILVAVFLTAFSSNVAIANIIIPV---LAEMS-LAIEIHPLYLILPAGLACSMAFHLPVSTP 524

  Fly   797 ANVVCAGVA 805
            .|.:.||.|
  Fly   525 PNALVAGYA 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hoe1NP_001285607.1 ArsB 345..839 CDD:223983 102/562 (18%)
P_permease 349..837 CDD:238536 102/558 (18%)
IndyNP_730363.2 SLC13_permease 68..545 CDD:238535 100/542 (18%)
dass 70..545 CDD:273267 99/540 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448698
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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