DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NR5A2 and Hr39

DIOPT Version :9

Sequence 1:NP_995582.1 Gene:NR5A2 / 2494 HGNCID:7984 Length:541 Species:Homo sapiens
Sequence 2:NP_476932.1 Gene:Hr39 / 35398 FlyBaseID:FBgn0261239 Length:808 Species:Drosophila melanogaster


Alignment Length:587 Identity:166/587 - (28%)
Similarity:259/587 - (44%) Gaps:154/587 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    20 PIGAGLPDRHG----------SPIPARGRLVMLPKVET-----EALGLARSHGEQGQMPEN-MQV 68
            |.|....:.||          |.:|:.|:......:::     :.:||..||      |.: ..:
  Fly   308 PAGTLYGNHHGIYRQMKVEASSTVPSSGQEAQNLSMDSASSNLDTVGLGSSH------PASPAGI 366

Human    69 SQFKMVNYSYDEDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKT 133
            |:.:::|        ..||:||||:||:|||:.:||||||||||||||.|.|.|:....||:..:
  Fly   367 SRQQLIN--------SPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSIS 423

Human   134 QRKRCPYCRFQKCLSVGMKLEAVRADRMRGGRNKF-----------GPMYKRDRALKQQKKALIR 187
            .||:||.|||:|||..||||||:|.||.||||:.:           .|:...|:|......|.:.
  Fly   424 TRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQAAAAAAAAAVA 488

Human   188 ANGLKLEAMSQVIQAMPSDLTISSAIQNIHSAS--KGLPLNHAALPPTDYDRSPFVTSPISMTMP 250
            :            |..|.        |.:|..:  .|:|:                  |.|.::|
  Fly   489 S------------QQQPH--------QRLHQLNGFGGVPI------------------PCSTSLP 515

Human   251 PHGSLQGYQTYGHFPSRAIKSEYPDPYTSSPESIMGYSYMDSYQTSSPASIPHLILELLKCE--- 312
            ...||.|         .::|||.           |..:...|.:|   .|:|.|:.|::..|   
  Fly   516 ASPSLAG---------TSVKSEE-----------MAETGKQSLRT---GSVPPLLQEIMDVEHLW 557

Human   313 ----PDEPQVQAKIMAYLQQEQANRSK-------HEK-----LSTFGL--------------MCK 347
                .:..::...:.|:.....::.|.       |.:     |::.||              :|.
  Fly   558 QYTDAELARINQPLSAFASGSSSSSSSSGTSSGAHAQLTNPLLASAGLSSNGENANPDLIAHLCN 622

Human   348 MADQTLFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVD 412
            :||..|:.||:|.:|...|:.:.:|||:.||.|.|.|||:....:|.:  ...|.|.:..|:::.
  Fly   623 VADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSI--DTPGEIKMSQGRKIT 685

Human   413 YSIIASQAGAT----LNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGV 473
            .|...|....|    :.||..|       ||.|:.|:.|:|.:|.:||...|...|:....|...
  Fly   686 LSQAKSNGLQTCIERMLNLTDH-------LRRLRVDRYEYVAMKVIVLLQSDTTELQEAVKVREC 743

Human   474 QEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNG-DVPYNNLLIEMLH 537
            ||:...:|..||:.:||....|||:||||:|:::......:|.|..|..:| |.   |||:|:|.
  Fly   744 QEKALQSLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKTRDGADF---NLLMELLR 805

Human   538 AK 539
            .:
  Fly   806 GE 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NR5A2NP_995582.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35 5/24 (21%)
NR_DBD_Lrh-1_like 86..178 CDD:143541 55/102 (54%)
FTZ-F1 box 155..184 11/39 (28%)
NR_LBD_Lrh-1 301..541 CDD:132754 76/277 (27%)
Phosphatidylglycerol phosphate binding. /evidence=ECO:0000269|PubMed:15897460 421..424 1/6 (17%)
Hr39NP_476932.1 NR_DBD_Lrh-1_like 376..468 CDD:143541 53/91 (58%)
NR_LBD_F2 617..779 CDD:132728 56/170 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156770
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278717at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24086
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.