DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adrb1 and Octbeta1R

DIOPT Version :9

Sequence 1:NP_036833.1 Gene:Adrb1 / 24925 RGDID:2059 Length:466 Species:Rattus norvegicus
Sequence 2:NP_001262843.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster


Alignment Length:495 Identity:158/495 - (31%)
Similarity:236/495 - (47%) Gaps:87/495 - (17%)


- Green bases have known domain annotations that are detailed below.


  Rat     9 GASEPCNLSSAAPLPDGAATAARLL----------------------------VLASPPASLLPP 45
            |.:||  |:|..|:.:.:|:.||.|                            |:|.....:  .
  Fly    29 GTNEP--LASKIPVLEESASHARYLKFIADGLIDEGLGSAVGSGSSIAVSVEDVVAGQAQDI--Q 89

  Rat    46 ASEGSAPLSQQWTAGMGL------LLALIVLLIVVGNVLVIVAIAKTPRLQTLTNLFIMSLASAD 104
            |||||.. ....::.:.|      ::..|:|..::||:||||::.:..:|:.:||.|::|||.||
  Fly    90 ASEGSTD-DADGSSHLALVFVKCFIIGFIILAAILGNMLVIVSVMRHRKLRIITNYFVVSLAVAD 153

  Rat   105 LVMGLLVVPFGATIVVWGRWEYGSFFCELWTSVDVLCVTASIETLCVIALDRYLAITLPFRYQSL 169
            :::.|..:.|.|::::.|:|.:||..|::|.|.||...||||..||.|::|||.||..|..|..:
  Fly   154 MLVALCAMTFNASVMISGKWMFGSVMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLI 218

  Rat   170 LTRARARALVCTVWAISALVSFLPILMHWWRAESDEARRCYNDPKCCDFVTNRAYAIASSVVSFY 234
            :|:.|...::..||...||:|||||...|: ..::..:...::|..|:|..|:||||.||.:||:
  Fly   219 MTQRRVFIMLLMVWLSPALLSFLPICSGWY-TTTENYKYLKSNPHICEFKVNKAYAIVSSSMSFW 282

  Rat   235 VPLCIMAFVYLRVFREAQKQVKKI-DSCERRFLTGPPRPPSPAPSPSPGPPRPADSLANGRSSKR 298
            :|..:|..:|.|:::||.:|.:.: .|.....|.......|..|.     |||:..:.....|..
  Fly   283 IPGIVMLSMYYRIYQEADRQERLVYRSKVAALLLEKHLQISQIPK-----PRPSIQVEQSTISTM 342

  Rat   299 RPSRLVALREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHRDLVPDRLFV-FFNWLGYANSAFN 362
            |       ||:||.:||||||..|.:|||||||..:|.:.....:..||.| ...|:||.|||.|
  Fly   343 R-------RERKAARTLGIIMSAFLICWLPFFLWYIVSSLCDSCITPRLLVGILFWIGYFNSALN 400

  Rat   363 PIIYCR-SPDFRKAFQRLLCCARRAA---CRRRAAHGDRPRASGCLARAGPPPSPGAPSDDDDDD 423
            ||||.. :.|||.||::.|......|   |||                       |...|||.|.
  Fly   401 PIIYAYFNRDFRAAFKKTLKSLFPYAFYFCRR-----------------------GRGRDDDRDL 442

  Rat   424 AGATPPARLLEPWAGCNGGTTTVDSDSSLDEPGRQGFSSE 463
            ....|..|      |.||...|....:.:........|||
  Fly   443 EFGGPSRR------GTNGAQRTGSGSAEMANCVNSTASSE 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adrb1NP_036833.1 7tm_1 75..366 CDD:278431 112/292 (38%)
7tm_4 76..>267 CDD:304433 72/191 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 264..302 8/37 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..466 14/66 (21%)
PDZ-Binding. /evidence=ECO:0000250 463..466 1/1 (100%)
Octbeta1RNP_001262843.1 7tm_4 112..>231 CDD:304433 45/118 (38%)
7tm_1 124..404 CDD:278431 112/292 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 230 1.000 Domainoid score I2359
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D328277at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44908
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X822
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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