Sequence 1: | NP_058761.2 | Gene: | Gabrb3 / 24922 | RGDID: | 2651 | Length: | 473 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
Alignment Length: | 544 | Identity: | 182/544 - (33%) |
---|---|---|---|
Similarity: | 271/544 - (49%) | Gaps: | 116/544 - (21%) |
- Green bases have known domain annotations that are detailed below.
Rat 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSG 101
Rat 102 IP--LNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMD 164
Rat 165 LRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGA 229
Rat 230 YPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLR 294
Rat 295 ETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQK-----KLAEKTAKAKNDRS 354
Rat 355 KSEIN---------------------------------------------RVDAHGN-------I 367
Rat 368 LLAPMDVHNEMNEV-----------------------AGSVGDTRNSAISFDNSGIQYRKQSMPK 409
Rat 410 EGHGRYMG-----------------DRSIPHKKTHLRRRSSQLKIKIPDLTDVNA--------ID 449
Rat 450 RWSRIVFPFTFSLFNLVYWLYYVN 473 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gabrb3 | NP_058761.2 | LIC | 10..471 | CDD:273305 | 181/540 (34%) |
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 75/182 (41%) |
Neur_chan_memb | 274..588 | CDD:397193 | 90/322 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D226476at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_101786 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |