Sequence 1: | XP_017457398.1 | Gene: | Dmd / 24907 | RGDID: | 2507 | Length: | 3682 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036722.1 | Gene: | Dys / 42327 | FlyBaseID: | FBgn0260003 | Length: | 3598 | Species: | Drosophila melanogaster |
Alignment Length: | 3940 | Identity: | 1128/3940 - (28%) |
---|---|---|---|
Similarity: | 1806/3940 - (45%) | Gaps: | 797/3940 - (20%) |
- Green bases have known domain annotations that are detailed below.
Rat 12 EREDVQKKTFTKWINAQFSKFGKQHIDNLFSDLQDGKRLLDLLEGLTGQKLPKEKGSTRVHALNN 76
Rat 77 VNKALQVLQKNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKTIMAGLQQTNS-EKIL 140
Rat 141 LSWVRESTRNYP-QVNVLNFTSSWSDGLALNALIHSHRPDLFDWN-SVVSQQSATQRLEHAFNIA 203
Rat 204 KCQLGIEKLLDPEDVATTYPDKKSILMYITSLFQVL-------------------PQQVSIEAIR 249
Rat 250 EVEMLPRPSKVTREEHFQLHHQMHYSQQITVSLAQGYEQTSSSPKPRFKSYAFTQAAYVATSDSS 314
Rat 315 QSPYPSQHLEAPGSKSFGSSLIETEVNLDSYQTALEEVLSWLLSAEDTLRAQGEISKDVEEVKEQ 379
Rat 380 FHAHEGFMMDLTSHQGLVGNVLQLGSRLVGKGK-----LTEDEETEVQEQMNLLNSRWECLRVAS 439
Rat 440 MEKQSNLHKVLMDLQNQKLKELDDWLTKTEERTKKMEEEPLGPDLEDLKCQVQQHKVLQEDLEQE 504
Rat 505 QVRVNSLTHMVVVVDESSGDHATAALEEQLKVLGDRWANICKWTEDRWILLQDILLKWQRFTEEQ 569
Rat 570 CLFSKWLSEKEDAMKNIQTSGFEDQNEMVSSLQNISALKIDLEKKKQSMEKLSSLNQDLLSALKN 634
Rat 635 -KSVTQKMEMWMENFAQRWDNLTQKLEKSSAQISQAVTTTQPSLTQTTVMETVTMVTTREQIMVK 698
Rat 699 HAQEELPPPPPQKKRQITVDSEIRKRLDVDIT----ELHSWITRSEAVLQSSEFAVYRKEGNISD 759
Rat 760 LKEKVNAIAREKAEKFRKLQDASRSAQALVEQMVNEGVNAESIRQASEQL------NSRWTEFCQ 818
Rat 819 LLSERVNWLEY------QNNIITFYNQLQQLEQMTTTAENLLKTQP----TTLSEP------TAI 867
Rat 868 KSQLKICKDEVNRLSA------LQPQIERLKIQSLTLKEKGQGPMFLDADFVAFTNHFNYVFDGV 926
Rat 927 RAREKELQTIFDTLPPMRYQETMSSIRTWIQQSENKLSIPHLSVTEYEIMEERLGKLQALQSSLK 991
Rat 992 EQQNGFNYLNATVKEIAKKAPSEISQKYQSEFEEVEGRWKKLSTQLVEHCQKLEEHMNKLRKFQN 1056
Rat 1057 HKKTLQKWMAEVDVFLKEEWPALGDAEILKKQLKQCRLLVGDIQTIQPSLNSVNEGGQKIKSEAE 1121
Rat 1122 FEFASRLEKELKELNTQWDHICRQVYTRKEALKAGLDKTVSL-QKDLSEMHEWMTQAEEEYLERD 1185
Rat 1186 FEYKTP----------DELQTAVEEMKRAKEEALQKEAKVKLLTETVNSVISQAPPAAQEALKKE 1240
Rat 1241 LETLTTNYQWLCTRLNGK---------CKT--LEEVWACWHELLSYLEKANKWLNEVELKLKATE 1294
Rat 1295 NVPAGAEEITEVLESLENLMH-HSEENPNQIRLLAQTLTDGGVMDELINEELETFNSRWRELHEE 1358
Rat 1359 AVRKQKLLEQSIQSAQEIEKSLHLIQESLEFIDKQLAAYIADKVDAAQMPQEAQKIQSDLTSHEI 1423
Rat 1424 SLEEMKKHNQGKDANQRVLSQIDVAQKKLQDVSIKFRLFQKPA--------NFEQRLEESKMILD 1480
Rat 1481 EVKMHLPALETKSVEQEVVQSQLSHCVNLYKSLSEVKSEVEMVIKTGRQIVQKKQTENPKELDER 1545
Rat 1546 VTALKLHYNELGAKVTERKQQLEKCLKLSRKMRK------------------------------- 1579
Rat 1580 ---------EMNVLTEWLAATDTELTKRSAVEGMPSNLDSEVAWGKATQKEIEKQKAHLKSVTEL 1635
Rat 1636 GD--SLKTVLGKKETLVE------DKLTLLNSNWIAVT-----SRVEEWLNLLLEYQKHMESFDQ 1687
Rat 1688 NVEHITKWIIHTDELLDESEKRKPQQKED----ILKRLKAEMNDIRPKVDATRDQAAKLMANRGD 1748
Rat 1749 YCRKIVEPQ---ISELNRRFAAIS------------HRIKTGK---------ASIPLKELEQFNS 1789
Rat 1790 DIQKL-LEPLEAEIQQGVNLKE--EDFNK---------DMSEDNEGTVNELLQRGDNLQQRITDE 1842
Rat 1843 RKREEIKLKQQLLQTKHNALKDLRSQRRKKAL------EISHQWYQYKSQADDLLKCLDE----- 1896
Rat 1897 ---IEKKLASLPEPRDERKIKEIDRELQKKKEELNAVRRQAESLSENGAAMAVEPTQIQLSKRWR 1958
Rat 1959 EI--------------ESNFAQFRRLNFAQIHTLHEETMVVT-TEDMPLDVSYVPSTYLTEISHI 2008
Rat 2009 LQALSEVEQLLNAPELNAKDFEDLFKQEESLKNIKENLQQISGRIDVIHKKKTAALQSATPMERV 2073
Rat 2074 KLQEAVSQMDFHWEKLNRMYKERQGRFDRSVEKWRHFHYDMKVFNQWLNDVEQFFKKTQNPENWE 2138
Rat 2139 HAKYKWYLKELQDGIGQRQAVVRTLNATGEEIIQQSSKTDANILQEKLGSLSLRWHEVCKELAER 2203
Rat 2204 RKRVEEQKNVFSEFQRDLNEFVSWLEEADNIATTPPGDEEQLKEKLEQVKLLTEELPLRQGILKQ 2268
Rat 2269 LNETGGAVLVSAPIRPEEQDKLEKKLKQTN-----LQWI--------KVSRALPEKQGELEVHIK 2320
Rat 2321 DFRQFEEQLDHLLLWLSPIRNQLEIYNQPSQPGPFDLKETEVTVQAKQPDVERLLSKGQHLYKEK 2385
Rat 2386 PSTQPVKRKLEDLRSEWEAVNHLLWELRTKQPDRAPGLSTTGASASQTVTVVTQPVDTKETVISK 2450
Rat 2451 LEMPSSLLLEVPALADFNRAWTELTDWLSLLDRVIKSQRVMVGDLEDINEMIIKQKATLQDLEQR 2515
Rat 2516 RPQLEELITAAQNLKNKTSNQE-----------ARTIITD--------RIERIQIQWDEVQEQLQ 2561
Rat 2562 NRRQQLNEMLKDSTQWLEAKE-EAEQVIGQARGKLDSWKEGPHTMDAIQKKITETKQLAKDLRQR 2625
Rat 2626 QINVDVANDLALKLLRDYSADDTRKVHMITENINTSWGNILKRVSEREAALEETQRLLQQFPLDL 2690
Rat 2691 EKFLAWITEAETTA-NVLQDASRKEKLLEDSRGVRELMKPWQDLQGEIEAHTDIYHNLDENGQKI 2754
Rat 2755 LRSLEGSDEAPLLQRRLDNMNFKWSELRKKSLNIRSHLEVSSDQWKRLHLSLQELLVWLQLKDDE 2819
Rat 2820 LSR--QAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETVRIFLTEQ----PLEGLEKLY- 2877
Rat 2878 QEPRELPPEERAQNVTRLLRKQAEEVNTEWDKLNLHSADWQRKIDEALERLQELQEAADELDLKL 2942
Rat 2943 RQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVNHVNDLAHHLTTLGIQLSPYNLS 3007
Rat 3008 ILEDLNTRWRLLQVAVEDR--------VRQLHEAHRD---------FGPASQHFLSTSVQGPWER 3055
Rat 3056 AISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSA 3120
Rat 3121 ACDALDQHNLK-QNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTG 3184
Rat 3185 RIRVLSFKTGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGS 3249
Rat 3250 NIEPSVRSCFQFA---------NNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKC 3305
Rat 3306 NICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKN 3370
Rat 3371 KFRTKRYFAKHPRMGYLPVQTVLEGDNMETPASSPQ-LSH---DDTHSRIEHYASRLAEME-NSN 3430
Rat 3431 GSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRSPAQILISLESEERGELERILADLEEE 3495
Rat 3496 NRNLQAEYDRL--KQQ----HEHKGLSPLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEAR 3554
Rat 3555 MQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSESM 3619
Rat 3620 GEEDLLSPPQDTSTGLEEVMEQLNNSFPSSRGHNVGSLFH 3659 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dmd | XP_017457398.1 | None | |||
Dys | NP_001036722.1 | CH | 13..111 | CDD:278723 | 54/97 (56%) |
CH | 129..225 | CDD:278723 | 45/100 (45%) | ||
SPEC | 312..525 | CDD:238103 | 82/226 (36%) | ||
SbcC | <325..957 | CDD:223496 | 172/723 (24%) | ||
Smc | <816..1591 | CDD:224117 | 186/835 (22%) | ||
SPEC | 1174..1365 | CDD:238103 | 48/191 (25%) | ||
SPEC | 1289..1485 | CDD:295325 | 55/196 (28%) | ||
SPEC | 2369..2576 | CDD:238103 | 72/219 (33%) | ||
SPEC | 2477..2714 | CDD:238103 | 88/249 (35%) | ||
WW | 2852..2882 | CDD:238122 | 18/29 (62%) | ||
EF-hand_2 | 2883..2997 | CDD:286194 | 58/118 (49%) | ||
EF-hand_3 | 3001..3100 | CDD:286195 | 62/98 (63%) | ||
ZZ_dystrophin | 3110..3158 | CDD:239074 | 33/47 (70%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 247 | 1.000 | Domainoid score | I2085 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG4286 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1367 | 1.000 | Inparanoid score | I116 |
OMA | 1 | 1.010 | - | - | QHG46633 | |
OrthoDB | 1 | 1.010 | - | - | D46278at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001792 | |
OrthoInspector | 1 | 1.000 | - | - | otm46205 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR11915 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2389 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.980 |