DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc22a1 and Orct

DIOPT Version :9

Sequence 1:NP_036829.1 Gene:Slc22a1 / 24904 RGDID:3224 Length:556 Species:Rattus norvegicus
Sequence 2:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster


Alignment Length:546 Identity:199/546 - (36%)
Similarity:301/546 - (55%) Gaps:40/546 - (7%)


- Green bases have known domain annotations that are detailed below.


  Rat     5 DDVLEQVGEFGWFQKQAFLLLCLISASLAPIYVGIVFLGFTPGHYC----QNPGVAELSQRCGWS 65
            |||:..:||||.:||:.:.||||.:...|...:..|||...|...|    :|..:.|||... |:
  Fly     4 DDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHL-WN 67

  Rat    66 QAEELNYTVPGLGPSDEASFLSQCMRYEVDWNQSTLDCVDPLSSLVANRSQLPLGPCEHGWVYDT 130
                |:|      |.:|     :|..|:||:.:..|:...|.||   |.::    .|. .:|||.
  Fly    68 ----LSY------PENE-----RCSYYDVDYTEEYLNGSIPRSS---NETK----TCS-SYVYDR 109

  Rat   131 PG--SSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKLCLLVTTLVTSVSGVL 193
            ..  :|.|||:||||..:.......|...||..||||:.|.::|:.|||.....:.::..:.|||
  Fly   110 SKYLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVL 174

  Rat   194 TAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTAILYQMAFTVGLVGLAGVAYA 258
            .||||:|.|..:.|::.|..:.|.::..|.:..|.|||.||....:..||.|:||.:..||.||.
  Fly   175 AAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYF 239

  Rat   259 IPDWRWLQLAVSLPTFLFLLYYWFVPESPRWLLSQKRTTRAVRIMEQIAQKNGKVPPADLKMLCL 323
            |.||||||:|::||..|||.|||.:|||.||||.:.|...|..|:|:.|::|....|.::....:
  Fly   240 IHDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLV 304

  Rat   324 EEDASEKRSPSFA---------DLFRTPNLRKHTVILMYLWFSCAVLYQGLIMHVGATGANLYLD 379
            :|.|.:|:....|         ||.|.||||:.|:::.:.||..:.:|.||..:....|.|..::
  Fly   305 DEVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVN 369

  Rat   380 FFYSSLVEFPAAFIILVTIDRIGRIYPIAASNLVTGAACLLMIFIPHELHWLNVTLACLGRMGAT 444
            |..|..||.|...::|.|::|.||...:..:.:|.|.:.|..||:|.:::||.|..|.:|::..|
  Fly   370 FMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAIT 434

  Rat   445 IVLQMVCLVNAELYPTFIRNLGMMVCSALCDLGGIFTPFMVFRLMEVWQALPLILFGVLGLTAGA 509
            .....:.:.:||.:||.:||:|:...|.:..:|||..|::.. |.|:|:.||||:.|.|.||||.
  Fly   435 SSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKL-LGEIWRPLPLIICGALSLTAGL 498

  Rat   510 MTLLLPETKGVALPETIEEAENLGRR 535
            ::||||||....:|||||:.||.|::
  Fly   499 LSLLLPETLNKPMPETIEDGENFGKK 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a1NP_036829.1 2A0119 12..525 CDD:273328 189/527 (36%)
MFS 125..515 CDD:119392 149/400 (37%)
OrctNP_001262908.1 2A0119 11..514 CDD:273328 189/527 (36%)
MFS 135..491 CDD:119392 130/356 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347087
Domainoid 1 1.000 272 1.000 Domainoid score I1731
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 328 1.000 Inparanoid score I2378
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 1 1.000 - - mtm12320
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.900

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