DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc22a1 and CG7458

DIOPT Version :9

Sequence 1:NP_036829.1 Gene:Slc22a1 / 24904 RGDID:3224 Length:556 Species:Rattus norvegicus
Sequence 2:NP_649374.1 Gene:CG7458 / 40441 FlyBaseID:FBgn0037144 Length:572 Species:Drosophila melanogaster


Alignment Length:556 Identity:153/556 - (27%)
Similarity:263/556 - (47%) Gaps:37/556 - (6%)


- Green bases have known domain annotations that are detailed below.


  Rat     3 TVDDVLEQVGEFGWFQKQAFLLLCLISASLAPIYVGIVFLGFTPGHYCQNPGVAELSQRCGWSQA 67
            ::|.:|.::|:||.:|...::|||:.....|...:..||...|..|.|..|.....|     |..
  Fly    37 SLDAILVRIGQFGRYQIINYVLLCVPMLFNAFFSISYVFTASTVVHRCTVPQCDSPS-----SVY 96

  Rat    68 EE--LNYTVPGLGPSDEASFLSQCMRYEVDWNQSTLDCVDP-----LSSLVANRSQLPLGPCEHG 125
            ||  |.:|:|     .:.|....|.||..:.:.:.....||     |.......|:    .|...
  Fly    97 EEDWLGFTIP-----KKNSAWDDCHRYAANISDAISGYTDPSGQYCLKEYFTITSE----TCGRD 152

  Rat   126 WVYDTPGSSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKLCLLVTTLVTSVS 190
            :.:.....:|.|||.:.|.|.||:.:..:..|:|.|:|..:.||.|||:||:..|.|...|:::.
  Fly   153 FKFRDEEKTISTEFGIYCEDEWKLSMVGTINNVGQFVGIPLGGYFADRYGRRTMLAVAGSVSALM 217

  Rat   191 GVLTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTAILYQMAFTVGLVGLAGV 255
            ||:.:::.:|:..|:|..|...|....:.:.:.|..|.||...|...|.:..:.:.:|...|..:
  Fly   218 GVIRSLSSNYSMFLVFEFLDMAVGSTLFPTAFLLAIELVGPKRRVAAATIITIFYALGEAFLGFL 282

  Rat   256 AYAIPDWRWLQLAVSLPTFLFLLYYWFVPESPRWLLSQKRTTRAVRIMEQIAQKNGK-VPPADLK 319
            |..:..||||...:..|..|.:|:.|.:|||.||||||....:|..::.:.|:.|.: :|...|.
  Fly   283 ASQVQHWRWLLRVLYAPAVLQILFLWILPESVRWLLSQGAEEKASNVLRRAARINQRPLPEEQLN 347

  Rat   320 MLCLEEDASEKRSPSFADLFRTPNLRKHTVILMYL--------WFSCAVLYQGLIMHVGATGANL 376
            .|.    .|.::..|.|:..:.|.:|  .|:...|        ||:..::..||.::....|.|.
  Fly   348 DLL----TSNRQKLSQANESQYPIMR--AVVFFSLRIANCCLCWFTHTLIALGLSLNSVNLGGNK 406

  Rat   377 YLDFFYSSLVEFPAAFIILVTIDRIGRIYPIAASNLVTGAACLLMIFIPHELHWLNVTLACLGRM 441
            |.:|..:..::.|...:.||.:||:||.:.:.||.|:..........:|.:.:..::.|..:|::
  Fly   407 YTNFMLNGFIQIPGLLLPLVIMDRVGRRHSLCASMLLCAICMGASAAVPADNYAGSLALFLIGKL 471

  Rat   442 GATIVLQMVCLVNAELYPTFIRNLGMMVCSALCDLGGIFTPFMVFRLMEVWQALPLILFGVLGLT 506
            ..|...|::....:|::||.:||..:.:||.:..:|.:..| ....|.:.:...|.|||....|.
  Fly   472 AITCSFQILYFFTSEIFPTNVRNTLLSLCSMVGRIGSMLAP-QTPLLAKYYIYAPQILFATFALI 535

  Rat   507 AGAMTLLLPETKGVALPETIEEAENLGRRKSKAKEN 542
            :|.:||..|||....||.|||||.:|.:.|.:::.:
  Fly   536 SGFLTLAFPETADKVLPTTIEEARDLNQAKRRSERS 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a1NP_036829.1 2A0119 12..525 CDD:273328 144/528 (27%)
MFS 125..515 CDD:119392 109/398 (27%)
CG7458NP_649374.1 2A0119 46..554 CDD:273328 144/528 (27%)
MFS 161..544 CDD:119392 109/389 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347301
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.960

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