DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbxas1 and Cyp6d4

DIOPT Version :9

Sequence 1:NP_036819.1 Gene:Tbxas1 / 24886 RGDID:3826 Length:533 Species:Rattus norvegicus
Sequence 2:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster


Alignment Length:554 Identity:156/554 - (28%)
Similarity:265/554 - (47%) Gaps:86/554 - (15%)


- Green bases have known domain annotations that are detailed below.


  Rat    18 VTLSVVLLALLKWYSTSAFSRLRKLGIRHPEPS--PFVGNLMFFRQ------GFWESHLELRERY 74
            :.|:|.||.|..:|....:....:.|....:.|  ||......:||      ..::.:::.:|| 
  Fly     5 ILLAVTLLTLAWFYLKRHYEYWERRGFPFEKHSGIPFGCLDSVWRQEKSMGLAIYDVYVKSKER- 68

  Rat    75 GPLCGYYLGRRMYIVISDPDMIKEVLVENFSNFSNRMASGL----EPKLIADSVLMLRDRRWEEV 135
              :.|.||..|..::|.|.|:.:.||.::|::|.:|   |:    |...::.::..||.:.|..:
  Fly    69 --VLGIYLLFRPAVLIRDADLARRVLAQDFASFHDR---GVYVDEERDPLSANIFSLRGQSWRSM 128

  Rat   136 RGALMSAFSPEKLNEMTPLISQACELLLSHLKHSAASGDAF---DIQRCYCCFTTNVVASVAFGI 197
            |..|...|:..||..|........:.:::||:..... :.|   ||::....:..:::||..||:
  Fly   129 RHMLSPCFTSGKLKSMFSTSEDIGDKMVAHLQKELPE-EGFKEVDIKKVMQNYAIDIIASTIFGL 192

  Rat   198 EVNSQDAPEDPFVQHCQRVFAFSTPRPLLAL--------------ILSFPSIMVPLARILPNKNR 248
            :|||.:.|::.|             |.|::|              |...|||...|.||      
  Fly   193 DVNSFENPDNKF-------------RKLVSLARANNRFNAMFGMMIFLVPSIAQFLFRI------ 238

  Rat   249 DELNGFFNTLIRNVIALRDKQTAEER------RGDFLQMVLDAQRSMSSVGVEAFDMVTEALSSA 307
                ||.|.:...::.: .|:|.|.|      |.|.||:::..:.:..   ::..|..:.::...
  Fly   239 ----GFKNPVGLAMLQI-VKETVEYREKHGIVRKDLLQLLIQLRNTGK---IDENDEKSFSIQKT 295

  Rat   308 ECMGDPPQRCHPTSTAKPLTVDEIAGQAFLFLIAGHEITTNTLSFITYLLATHPECQERLLKEVD 372
                       |....|.::::.|..|||:|.|||.|.|.:|.:|..|.||.:||..:||..|||
  Fly   296 -----------PDGHIKTISLEAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEVD 349

  Rat   373 LFMEKHPAP-EYCNLQEGLPYLDMVVAETLRMYPPAFRFTREAAQDCEV--LGQHIPAGSVLEIA 434
            ..:.|:... .|.:|.: :.:||:.|.||:|.||......||..||..|  ....||.|:.:.|:
  Fly   350 ETLAKNDGKITYDSLNK-MEFLDLCVQETIRKYPGLPILNRECTQDYTVPDTNHVIPKGTPVVIS 413

  Rat   435 VGALHHDPEHWPNPETFDPERFTAEARLQQKPFTYLPFGAGPRSCLGVRLGLLVVKLTLLQVLHK 499
            :..:|||.|::|:|||:|||||:.|:| ...|..::|||.|||.|:..|:|.:..||.::::|..
  Fly   414 LYGIHHDAEYFPDPETYDPERFSEESR-NYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKILQN 477

  Rat   500 FRFEACPETQVPLQLESKSALCPKNGVYVKIVSR 533
            |..|....:::..: .|..||.||:||.|::..|
  Fly   478 FNVEVMSRSEIEFE-NSGIALIPKHGVRVRLSKR 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbxas1NP_036819.1 p450 47..530 CDD:278495 148/520 (28%)
Cyp6d4NP_651082.1 p450 58..500 CDD:278495 138/489 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.870

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