DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbxas1 and Cyp6a8

DIOPT Version :9

Sequence 1:NP_036819.1 Gene:Tbxas1 / 24886 RGDID:3826 Length:533 Species:Rattus norvegicus
Sequence 2:NP_523749.2 Gene:Cyp6a8 / 36666 FlyBaseID:FBgn0013772 Length:506 Species:Drosophila melanogaster


Alignment Length:534 Identity:144/534 - (26%)
Similarity:258/534 - (48%) Gaps:51/534 - (9%)


- Green bases have known domain annotations that are detailed below.


  Rat    14 TVVTVTLSVVLLALLKWYSTSAFSRLRKLGIRHPEPSPFVGNLMFFRQG------FWESHLELRE 72
            |.:...::|.|||:|.:|.....:..::.||....|....||:...::.      |.:.:.:.||
  Fly     4 TYILFQVAVALLAILTYYIHRKLTYFKRRGIPFVAPHLIRGNMEELQKTKNIHEIFQDHYNKFRE 68

  Rat    73 RYGPLCGYYLGRRMYIVISDPDMIKEVLVENFSNFSNRMASGL------EPKLIADSVLMLRDRR 131
            ...|..|::..:.....:.|.::.|::|:::||||||:   |:      :|  |:..:..|...:
  Fly    69 SKAPFVGFFFFQSPAAFVIDLELAKQILIKDFSNFSNK---GIFYNEKDDP--ISAHLFNLDGAQ 128

  Rat   132 WEEVRGALMSAFSPEKLNEMTPLISQACELLLSHLKHSAASGDAFDIQRCYCCFTTNVVASVAFG 196
            |..:|..|.|.|:..|:..|.|.:.......::.:..........:|:.....||.:|:.:.|||
  Fly   129 WRLLRNKLSSTFTSGKMKLMYPTVVSVANEFMTVMHEKVPKNSVLEIRDLVARFTVDVIGTCAFG 193

  Rat   197 IEVNSQDAPEDPFVQHCQRVFAFSTPRPLL-ALILSFPSIMVPLARILPNKNRDELNGFFNTLIR 260
            |:.||....:..|:...:|.........|| ..:.|:|.:...|..:   :....:..|::.::.
  Fly   194 IQCNSLRDEKAEFLYFGKRSLVDKRHGTLLNGFMRSYPKLARKLGMV---RTAPHIQEFYSRIVT 255

  Rat   261 NVIALRDKQTAEERRGDFLQMVLDAQRSMSSVGVEAFDMVTEALSSAECMGDPPQRCHPTSTAKP 325
            ..:|:|:|:  ..:|.||:.|:::. ::...:.:|..|:|                       :.
  Fly   256 ETVAVREKE--HIKRNDFMDMLIEL-KNQKEMTLENGDVV-----------------------RG 294

  Rat   326 LTVDEIAGQAFLFLIAGHEITTNTLSFITYLLATHPECQERLLKEVDLFMEKHPAPEYCNLQEGL 390
            ||::|:..|||:|.|||.|.:::|:.|..|.||.:|:.|:::..||:..:|:|.........:.|
  Fly   295 LTMEEVLAQAFVFFIAGFETSSSTMGFALYELAKNPDIQDKVRAEVEEVIEQHDQNFTYECTKDL 359

  Rat   391 PYLDMVVAETLRMYPPAFRFTREAAQDCEVLGQH---IPAGSVLEIAVGALHHDPEHWPNPETFD 452
            .||:.|:.||||:|.......|.||:...|.|..   |.||..:.|...|:||||..:|.|..|.
  Fly   360 KYLNQVLDETLRLYTIVPNLDRMAAKRYVVPGHPNFVIEAGQSVIIPSSAIHHDPSIYPEPFEFR 424

  Rat   453 PERFTAEARLQQKPFTYLPFGAGPRSCLGVRLGLLVVKLTLLQVLHKFRFEACPETQVPLQLESK 517
            ||||:.|....:....:||||.|||:|:|:|.|.:..::.|..::..|:|..|.:|..||..:.|
  Fly   425 PERFSPEESAGRPSVAWLPFGDGPRNCIGLRFGQMQARIGLALLIRNFKFSTCSKTPNPLVYDPK 489

  Rat   518 S-ALCPKNGVYVKI 530
            | .|..|:|:|:|:
  Fly   490 SFVLGVKDGIYLKV 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbxas1NP_036819.1 p450 47..530 CDD:278495 134/499 (27%)
Cyp6a8NP_523749.2 p450 39..503 CDD:278495 134/497 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130979
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm8924
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.770

Return to query results.
Submit another query.