DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbxas1 and Cyp6a9

DIOPT Version :9

Sequence 1:NP_036819.1 Gene:Tbxas1 / 24886 RGDID:3826 Length:533 Species:Rattus norvegicus
Sequence 2:NP_523748.2 Gene:Cyp6a9 / 36663 FlyBaseID:FBgn0013771 Length:504 Species:Drosophila melanogaster


Alignment Length:532 Identity:148/532 - (27%)
Similarity:254/532 - (47%) Gaps:49/532 - (9%)


- Green bases have known domain annotations that are detailed below.


  Rat    15 VVTVTLSVVLL----ALLKWYSTSAFSRLRKLGIRHPEPSPFVGNLMFFR-----QGFWESHLEL 70
            |.:|.|::|::    .||||  ..|....:.|.|...||...:|:|...:     ...|..:...
  Fly     3 VYSVLLAIVVVLVGYLLLKW--RRALHYWQNLDIPCEEPHILMGSLTGVQTSRSFSAIWMDYYNK 65

  Rat    71 RERYGPLCGYYLGRRMYIVISDPDMIKEVLVENFSNFSNR-MASGLEPKLIADSVLMLRDRRWEE 134
            ....||..|:|..:|..|::.|..:.|.:|::.|:.|::| .....|...::..:.:|..::|:.
  Fly    66 FRGTGPFAGFYWFQRPGILVLDISLAKLILIKEFNKFTDRGFYHNTEDDPLSGQLFLLDGQKWKS 130

  Rat   135 VRGALMSAFSPEKLNEMTPLISQACELLLSHLKHSAASGDAFDIQRCYCCFTTNVVASVAFGIEV 199
            :|..|...|:..|:..|.|.:.:.....:.....:.......:::.....|||:|:.:.|||||.
  Fly   131 MRSKLSYTFTSGKMKYMFPTVVKVGHEFIEVFGQAMEKSPIVEVRDILARFTTDVIGTCAFGIEC 195

  Rat   200 NSQDAPEDPFVQHCQRVFAFSTPRPL-LALILSFPSIMVPLARILPNK-NRDELNGFFNTLIRNV 262
            :|...||..|....:|........|: :|.|.||.:    |||.|..| ..:|...||..::|..
  Fly   196 SSLKDPEAEFRVMGRRAIFEQRHGPIGIAFINSFQN----LARRLHMKITLEEAEHFFLRIVRET 256

  Rat   263 IALRDKQTAEERRGDFLQMVLDAQRSMSSVGVEAFDMVTEALSSAECMGDPPQRCHPTSTAKPLT 327
            :|.|:|...  ||.||:..::|.:.|              .|:.:|           :..:..||
  Fly   257 VAFREKNNI--RRNDFMDQLIDLKNS--------------PLTKSE-----------SGESVNLT 294

  Rat   328 VDEIAGQAFLFLIAGHEITTNTLSFITYLLATHPECQERLLKEVDLFMEKHPAPEYCNLQEGLPY 392
            ::|:|.|||:|..||.|.::.|:.|..|.||.|.:.|:|:.||....:.|:.........:.:.|
  Fly   295 IEEMAAQAFVFFGAGFETSSTTMGFALYELAQHQDIQDRVRKECQEVIGKYNGEITYESMKDMVY 359

  Rat   393 LDMVVAETLRMYPPAFRFTREAAQDCEVLGQH---IPAGSVLEIAVGALHHDPEHWPNPETFDPE 454
            ||.|::||||:|.......||..:|.||.|..   |..|..:.|..||:|.|.:.:.||.||:|:
  Fly   360 LDQVISETLRLYTVLPVLNRECLEDYEVPGHPKYVIKKGMPVLIPCGAMHRDEKLYANPNTFNPD 424

  Rat   455 RFTAEARLQQKPFTYLPFGAGPRSCLGVRLGLLVVKLTLLQVLHKFRFEACPETQVPLQLESKSA 519
            .|:.|...::....:||||.|||:|:|:|.|.:..:..|..::::|:|..|.:|.:|:....|:.
  Fly   425 NFSPERVKERDSVEWLPFGDGPRNCIGMRFGQMQARSGLALLINRFKFSVCEQTTIPIVYSKKTF 489

  Rat   520 L-CPKNGVYVKI 530
            | ..:.|:::|:
  Fly   490 LISSETGIFLKV 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbxas1NP_036819.1 p450 47..530 CDD:278495 136/494 (28%)
Cyp6a9NP_523748.2 p450 35..499 CDD:278495 136/494 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130979
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm8924
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.770

Return to query results.
Submit another query.