DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbxas1 and Cyp28d2

DIOPT Version :10

Sequence 1:NP_036819.1 Gene:Tbxas1 / 24886 RGDID:3826 Length:533 Species:Rattus norvegicus
Sequence 2:NP_608911.1 Gene:Cyp28d2 / 33748 FlyBaseID:FBgn0031688 Length:501 Species:Drosophila melanogaster


Alignment Length:549 Identity:142/549 - (25%)
Similarity:236/549 - (42%) Gaps:96/549 - (17%)


- Green bases have known domain annotations that are detailed below.


  Rat    15 VVTVTLSVVLLALLKWYSTSAFSRLRKLGIRHPEPSPFVGNL--MFFRQGFWESHL-ELRERY-- 74
            |:.:||.|::...|.|    .|:..||.||:.....||||:.  :|.|:......: ::.|:|  
  Fly     9 VLVLTLLVLVYVFLTW----NFNYWRKRGIKTAPTWPFVGSFPSIFTRKRNIAYDIDDIYEKYKD 69

  Rat    75 -GPLCGYYLGRRMYIVISDPDMIKEVLVENFSNFSNRMASGLEPK----LIADSVLMLRDRRWEE 134
             ..:.|.:..|...:::..|:.|.::...:|.:|.|........|    ::.::..:|....|:|
  Fly    70 TDNMVGVFTTRVPQLLVMCPEYIHKIYATDFRSFHNNEWRNFVNKKTDMILGNNPFVLTGDEWKE 134

  Rat   135 VRGALMSAFSPEKLNEMTPLISQACELLLSHLKH----SAASG-DAFDIQRCYCCFTTNVVASVA 194
            .|..:|.|.||.::..:.|:....|:..:.:::.    :.:.| ||.|:..||   ||.||:...
  Fly   135 RRSEIMPALSPNRVKAVYPVSQSVCKKFVEYIRRQQQMATSEGLDAMDLSLCY---TTEVVSDCG 196

  Rat   195 FGIEVNSQDAPEDPFVQHCQRVF-------AFSTPRPLLALILSFPSIMVPLARILPNKNRDELN 252
            .|:...|......|.::..:|||       .:|....|...:..|.|:        |..|: |..
  Fly   197 LGVSAQSFTDTPTPLLKMIKRVFNTSFEFIFYSVVTNLWQKVRKFYSV--------PFFNK-ETE 252

  Rat   253 GFFNTLIRNVIALRDKQTAEERRGDFLQMVLDAQRSMSSVGVEAFDMVTEALSSAECMGDPPQRC 317
            .||..:||..|.|| .:..|::|.|||..:|..|..                             
  Fly   253 VFFLDIIRRCITLR-LEKPEQQRDDFLNYMLQLQEK----------------------------- 287

  Rat   318 HPTSTAKPLTVDEIAGQAFLFLIAGHEITTNTLSFITYLLATHPECQERLLKEV---DLFMEKHP 379
                  |.|..|.|......|::.|.|.|...|:.|..:|..:||.|:::.||:   ||..::  
  Fly   288 ------KGLHTDNILINTMTFILDGFETTALVLAHIMLMLGRNPEEQDKVRKEIGSADLTFDQ-- 344

  Rat   380 APEYCNLQEGLPYLDMVVAETLRMYPPAFRFTREAAQDCEVLGQ-----HIPAGSVLEIAVGALH 439
                   ...||:||..:.||||::.|.....:...:..|...:     |:..|.|:.|.|.|||
  Fly   345 -------MSELPHLDACIYETLRLFSPQVAARKLVTEPFEFANKNGRTVHLKPGDVVTIPVKALH 402

  Rat   440 HDPEHWPNPETFDPERFTAEARLQQKPF----TYLPFGAGPRSCLGVRLGLLVVKLTLLQVLHKF 500
            |||:::.:|.||.||||........|.:    .||.||.|||.|.|:|..|..:|..|:::|..|
  Fly   403 HDPQYYEDPLTFKPERFLESNGGGMKSYRDRGVYLAFGDGPRHCPGMRFALTQLKAALVEILRNF 467

  Rat   501 RFEACPETQVPLQLESKSALCP-KNGVYV 528
            ..:..|:|:...|::....:.. |.|:|:
  Fly   468 EIKVNPKTRSDNQIDDTFFMATLKGGIYL 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbxas1NP_036819.1 cytochrome_P450 74..527 CDD:477761 123/484 (25%)
Cyp28d2NP_608911.1 CYP6-like 74..495 CDD:410679 122/477 (26%)

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