DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbxas1 and Cyp6a16

DIOPT Version :9

Sequence 1:NP_036819.1 Gene:Tbxas1 / 24886 RGDID:3826 Length:533 Species:Rattus norvegicus
Sequence 2:NP_001285631.1 Gene:Cyp6a16 / 19836250 FlyBaseID:FBgn0031726 Length:500 Species:Drosophila melanogaster


Alignment Length:535 Identity:155/535 - (28%)
Similarity:259/535 - (48%) Gaps:67/535 - (12%)


- Green bases have known domain annotations that are detailed below.


  Rat    17 TVTLSVVLLALLKWYSTSAFSRLRKLGIRHPEPSPFVGNLMFFR-QGFWESHLELRERY------ 74
            |:.|...||:.|..|....|:.....||....|....|:  ||| |....|.| |:|.|      
  Fly     4 TLLLLTSLLSFLLGYLRYRFTYWELRGIPQLRPHFLFGH--FFRLQSVHYSEL-LQETYDAFRGS 65

  Rat    75 GPLCGYYLGRRMYIVISDPDMIKEVLVENFSNFSNRMASGLEPKLIADSVLMLRDRRWEEVRGAL 139
            ..:.|.|:..|...|:.|.|::|.||:.:|:||.:|.:...:|  :..::..|:...|..:|..|
  Fly    66 AKVAGTYVFLRPMAVVLDLDLVKAVLIRDFNNFVDRRSFHGDP--LTANLFNLQGEEWRNLRTKL 128

  Rat   140 MSAFSPEKLNEMTPLISQACELLLSHLKHSAAS-GDAFDIQRCYCCFTTNVVASVAFGIEVNSQD 203
            ...|:..|:..|...:|...:.|.........| |...::......:||:|:.|.|||.|.:|..
  Fly   129 SPTFTSGKMKYMFGTVSTVAQQLGGTFDELVGSQGAVLELHDLMARYTTDVIGSCAFGTECSSLR 193

  Rat   204 APEDPFVQHCQRVFAFSTPRPL------LALILSFPSIMVPLARILPNKNRDELNGFFNTLIRNV 262
            .|:..|.|..:|:|..|. |.:      :..:.|...:.:|: |||    ..::..|||.::|..
  Fly   194 EPQAEFRQVGRRIFRNSN-RSIRWRIFKMTYLSSLAKLGLPV-RIL----HPDITKFFNRIVRET 252

  Rat   263 IALRDKQTAEERRGDFLQMVLDAQRSMSSVGVEAFDMVTEALSSAECMGDPPQRCHPTSTAKPLT 327
            :.||:::..  ||.||:.::||.:|.                                ...|.||
  Fly   253 VELRERENI--RRNDFMDLLLDLRRQ--------------------------------ENGKGLT 283

  Rat   328 VDEIAGQAFLFLIAGHEITTNTLSFITYLLATHPECQERLLKEVDLFMEKHPAPEYCNLQEGLPY 392
            ::::|.|||:|.:||.|.:::.:|:..:.||.:.:.|::|..|::..:.||....|..:.| :||
  Fly   284 MEQMAAQAFVFFVAGFETSSSNMSYALFELAKNQDVQQKLRMEINDSIGKHGKLTYEAMME-MPY 347

  Rat   393 LDMVVAETLRMYPPAFRFTREAAQDCEVLGQH------IPAGSVLEIAVGALHHDPEHWPNPETF 451
            ||..:.||||.||.....||.|::|.|:....      :..|:.:.|.|.|:|:|||.:|.|..|
  Fly   348 LDQTITETLRKYPALSSLTRLASEDYEIPSPDGGDPVVLEKGTSVHIPVLAIHYDPEVYPEPHEF 412

  Rat   452 DPERFTAEARLQQKPFTYLPFGAGPRSCLGVRLGLLVVKLTLLQVLHKFRFEACPETQVPLQLES 516
            .||||..:|..::.|..:|.||.|||:|:|:|.|.:.||:.|:.:|.:|||...|.:...|::..
  Fly   413 RPERFAPDACRERHPTAFLGFGDGPRNCIGLRFGRMQVKVGLITLLRRFRFSLPPGSPTQLKVTK 477

  Rat   517 KS-ALCPKNGVYVKI 530
            :: .|.|.:||.:::
  Fly   478 RNLILLPSDGVRLQV 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbxas1NP_036819.1 p450 47..530 CDD:278495 146/503 (29%)
Cyp6a16NP_001285631.1 p450 32..492 CDD:278495 146/505 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm8924
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.870

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