DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FSHB and Gpb5

DIOPT Version :10

Sequence 1:NP_000501.1 Gene:FSHB / 2488 HGNCID:3964 Length:129 Species:Homo sapiens
Sequence 2:NP_001104334.1 Gene:Gpb5 / 3355097 FlyBaseID:FBgn0063368 Length:169 Species:Drosophila melanogaster


Alignment Length:87 Identity:21/87 - (24%)
Similarity:35/87 - (40%) Gaps:6/87 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    30 IEKEECRFCISINTTWCAGYCYTRDLV-YKDPARPKIQKTCTFKELVYETVRVPGC---AHHADS 90
            ::..||...:|:.:.|  |.|.:.::. :|.|.:......|...:.......:..|   |..:.|
  Fly    59 LQGHECWDYVSVWSCW--GRCDSSEISDWKFPYKRSFHPVCVHAQRQLVVAILKNCHPKAEDSVS 121

Human    91 LYTYPVATQCHCGKCDSDSTDC 112
            .|.|..|..|||..|.:..|.|
  Fly   122 KYQYMEAVNCHCQTCSTQDTSC 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FSHBNP_000501.1 GHB 17..123 CDD:214502 21/87 (24%)
Gpb5NP_001104334.1 GHB_like 45..144 CDD:200450 21/87 (24%)

Return to query results.
Submit another query.