Protein Alignment Pgc and cathD

DIOPT Version :9

• Sequence 1: NP_579818.1
• Gene: Pgc / 24864
• RGDID: 3943
• Length: 392
• Species: Rattus norvegicus
• Sequence 2: NP_001334713.1
• Gene: cathD / 45268
• FlyBaseID: FBgn0029093
• Length: 392
• Species: Drosophila melanogaster
• Alignment Length: 403
• Identity: 168/403 - (41%)
• Similarity: 227/403 - (56%)
• Gaps: 36/403 - (8%)

  Rat     6 VALLCLPLLEAS-----------LLRVPLRKMKSIRETMKEQGVLKDFLKTHKYDPGQKYHFGNF 59
            ||||.:..|.|:           ||||||.|.:|.|....:.|.....|:. :|..|.
  Fly     4 VALLLVAFLAAAVAHPNSQEKPGLLRVPLHKFQSARRHFADVGTELQQLRI-RYGGGD------- 60

  Rat    60 GDYSVLYEPMA-YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ--SEACTTHARFNPS 121
                 :.||:: ||||.|:|.|:||:|||||.|:||||||||||.|..|.  :.||..|.:::.|
  Fly    61 -----VPEPLSNYMDAQYYGPIAIGSPPQNFRVVFDTGSSNLWVPSKKCHLTNIACLMHNKYDAS 120

  Rat   122 KSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLA 186
            ||.||...|..|::|||:|||:|:...||:::..:.:.:|.|..:.:|||..||.|:||||:||.
  Fly   121 KSKTYTKNGTEFAIQYGSGSLSGYLSTDTVSIAGLDIKDQTFAEALSEPGLVFVAAKFDGILGLG 185

  Rat   187 YPGLSSGGATTALQGMLGEGALSQPLFGVYLGSQQGS-NGGQIVFGGVDKNLYTGEITWVPVTQE 250
            |..:|..........|..:|.:|.|:|..||.....| .||:|:|||.|.|.||||.|::|||::
  Fly   186 YNSISVDKVKPPFYAMYEQGLISAPVFSFYLNRDPASPEGGEIIFGGSDPNHYTGEFTYLPVTRK 250

  Rat   251 LYWQITIDDFLIGDQASGWCSSQGCQGIVDTGTSLLVMPAQYLSELLQTIGAQEGEYGEYFVSCD 315
            .||||.:|...|||..  .|.. |||.|.||||||:..|.:..:.:.|.||......|:|.||||
  Fly   251 AYWQIKMDAASIGDLQ--LCKG-GCQVIADTGTSLIAAPLEEATSINQKIGGTPIIGGQYVVSCD 312

  Rat   316 SVSSLPTLSFVLNGVQFPLSPSSYIIQ----EDNFCMVGLESISLTSESGQPLWILGDVFLRSYY 376
            .:..||.:.|||.|..|.|....||::    ....|:.|...:.:...:| |||||||||:..||
  Fly   313 LIPQLPVIKFVLGGKTFELEGKDYILRVAQMGKTICLSGFMGLDIPPPNG-PLWILGDVFIGKYY 376

  Rat   377 AIFDMGNNKVGLA 389
            ..|||||::||.|
  Fly   377 TEFDMGNDRVGFA 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pgc	NP_579818.1	A1_Propeptide	18..46	CDD:400357	11/27 (41%)
		pepsin_retropepsin_like	73..391	CDD:416259	145/324 (45%)
cathD	NP_001334713.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1339
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54317
OrthoDB	1	1.010	-	-		D1619495at2759
OrthoFinder	1	1.000	-	-		FOG0000066
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.830