DRSC/TRiP Functional Genomics Resources

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Protein Alignment FRG1 and frg-1

DIOPT Version :10

Sequence 1:NP_004468.1 Gene:FRG1 / 2483 HGNCID:3954 Length:258 Species:Homo sapiens
Sequence 2:NP_499696.2 Gene:frg-1 / 176719 WormBaseID:WBGene00014177 Length:274 Species:Caenorhabditis elegans


Alignment Length:277 Identity:116/277 - (41%)
Similarity:161/277 - (58%) Gaps:27/277 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     2 AEYSYVKSTKLVLKGTKT------KSKKKKSKDKKRKREEDEETQLDIVGIWWTVTNFGEISG-- 58
            |:||.||...|.||..|.      |.||||:||.|.|.:.|....    |.|..:.:..::.|  
 Worm     4 ADYSAVKGGGLKLKAGKKNLFKVGKEKKKKNKDDKEKIDPDTVEN----GGWRKIADEFDMKGGT 64

Human    59 TIAIEMDKG-----TYIHALDNGLFTLGAPHKEVDEGPSPPEQFTAVKL-SDSRIALKSGYGKYL 117
            .:|||:..|     ||:.|:|||.||:|.||.| .|||:|.|.|..||. .||:|:||:|:|:|:
 Worm    65 NVAIEVASGAGSTRTYVAAMDNGKFTIGFPHPE-GEGPNPEEIFALVKTPDDSKISLKTGFGRYV 128

Human   118 GINSDGLVVGRSDAIGPREQWEPVFQNGKMALLA-SNSCFIRC--NEAGDIEAKSKTAGEEEMIK 179
            |::|:..:|..::|||.|||:..|||.||.|..| |:..|:..  |:.|.|...|:||.|.||:.
 Worm   129 GVDSEYQLVAMAEAIGSREQFVLVFQEGKTAFQAVSSPLFLSTVPNKEGHIYVASRTATENEMVN 193

Human   180 IRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQ----SFQDHKLKISKEDSKILKKARKDGFL 240
            ||:.|.:| ...|....||:.|.::||..|||.:|    ..::..:.|..:|.|.:|||:.||..
 Worm   194 IRTDAIQE-GPVDWRSVEDRKNARECETAYVKMYQHSKVDLKNRHIAIDVKDKKGVKKAQADGSA 257

Human   241 HETLLDRRAKLKADRYC 257
            ||.|||||.|:|:||||
 Worm   258 HELLLDRRMKMKSDRYC 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FRG1NP_004468.1 Nuclear localization signal. /evidence=ECO:0000255 22..32 7/9 (78%)
FRG1 67..256 CDD:368803 88/201 (44%)
Bipartite nuclear localization signal. /evidence=ECO:0000255 235..251 9/15 (60%)
frg-1NP_499696.2 FRG1 78..273 CDD:368803 87/196 (44%)

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