DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gclm and dkgB

DIOPT Version :10

Sequence 1:NP_732780.1 Gene:Gclm / 248194 FlyBaseID:FBgn0046114 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_414743.1 Gene:dkgB / 944901 ECOCYCID:EG11648 Length:267 Species:Escherichia coli


Alignment Length:237 Identity:42/237 - (17%)
Similarity:86/237 - (36%) Gaps:76/237 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TKKYQNVVISTGNIIATELGQRK-SNEELYDGLKITLHTDSTAERVVVEKEIDELHGRVQRATQE 69
            |.:.::.|:.:..|.|.|||.|. ...::||       .::...:.:.|..:.            
E. coli    10 TFRLKDDVVISSVITALELGYRAIDTAQIYD-------NEAAVGQAIAESGVP------------ 55

  Fly    70 LTTRLTENGRNEISIGAKIFLNRHSTESVNQAVEELLHILSVTHVDNVVLAYHPNAVATATPVAT 134
                     |:|:.|..||::...|.:.:..:::|.|..|...:||..::               
E. coli    56 ---------RHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLI--------------- 96

  Fly   135 TKPPCSEDSNVSRATNWSQRNGKEGVAELKELYKTLEQYALKQQIT-QLGIADLDAAALEELHNS 198
                           :|...|.:..|.|.  :...||  |.||.:| ::||::.....:|     
E. coli    97 ---------------HWPSPNDEVSVEEF--MQALLE--AKKQGLTREIGISNFTIPLME----- 137

  Fly   199 AQVVPTIAQVNLSTCCV-VPPELQE-----FCTAHDIQLNTH 234
             :.:..:...|::|..: :.|.||.     :...|.|.:.::
E. coli   138 -KAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSY 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GclmNP_732780.1 AKR_SF <79..>235 CDD:444925 31/163 (19%)
dkgBNP_414743.1 dkgB 1..267 CDD:183012 42/237 (18%)

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