DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gclm and YPR1

DIOPT Version :9

Sequence 1:NP_001262845.1 Gene:Gclm / 248194 FlyBaseID:FBgn0046114 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_010656.1 Gene:YPR1 / 851974 SGDID:S000002776 Length:312 Species:Saccharomyces cerevisiae


Alignment Length:238 Identity:51/238 - (21%)
Similarity:93/238 - (39%) Gaps:63/238 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 QELTTRLTENG--RNEISIGAKIFLNRHSTE--SVNQAVEELLHILSVTHVDNVVLAYHPNAVAT 128
            :|:...:.::|  |.||.|..|::    .||  ....|:.:.|..|.:.:|| :.|.:.|     
Yeast    60 EEVGRAIKDSGVPREEIFITTKLW----GTEQRDPEAALNKSLKRLGLDYVD-LYLMHWP----- 114

  Fly   129 ATPVATTKP--------PCSEDSNVSRAT-NWSQRNGKEGVAELKELYKTLEQYALKQQITQLGI 184
             .|:.|.:.        |..||..|...| .|:.....|.:.||.:..||          ..:|:
Yeast   115 -VPLKTDRVTDGNVLCIPTLEDGTVDIDTKEWNFIKTWELMQELPKTGKT----------KAVGV 168

  Fly   185 ADLDAAALEELHNSA--QVVPTIAQVNLSTCCVVP-PELQEFCTAHDIQLNTHS----------D 236
            ::.....::||..|.  :|||...|:.:..  ::| .||..||....|.:..:|          .
Yeast   169 SNFSINNIKELLESPNNKVVPATNQIEIHP--LLPQDELIAFCKEKGIVVEAYSPFGSANAPLLK 231

  Fly   237 PELLLPVEQFDGLVPG-YTIDWTLRYQVHVRCRGVLTAKGYIV 278
            .:.::.:.:..|:.|. ..|.|:::             :||:|
Yeast   232 EQAIIDMAKKHGVEPAQLIISWSIQ-------------RGYVV 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GclmNP_001262845.1 Aldo_ket_red <79..>238 CDD:294321 42/182 (23%)
YPR1NP_010656.1 AKR_AKR3A1-2 7..296 CDD:381343 51/238 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0656
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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