DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gclm and gclm

DIOPT Version :9

Sequence 1:NP_001262845.1 Gene:Gclm / 248194 FlyBaseID:FBgn0046114 Length:285 Species:Drosophila melanogaster
Sequence 2:XP_009302077.1 Gene:gclm / 333974 ZFINID:ZDB-GENE-030131-5906 Length:274 Species:Danio rerio


Alignment Length:285 Identity:88/285 - (30%)
Similarity:140/285 - (49%) Gaps:45/285 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ISTGNIIATELGQRK----SNEELYDGLKITLHTDSTAERVVVEKEIDELHGRVQRATQELTTRL 74
            :.|||::.....::|    .:|||.|.::.||....||....::.|:..:   :..:..|.|..:
Zfish    19 LHTGNLVNRSRLKKKCPSSPSEELQDCIQGTLSEWFTAMPSSLDSELPSV---LDCSIPENTEAI 80

  Fly    75 TENGRNEISIGAKIFLNRHSTESVNQAVEELLHILSVTHVDNVVLAYHPNAVATATPVATTKPPC 139
            |...|.|:.:..|:||......|:..||:.....|.|:.:|:|::|                ||.
Zfish    81 TPEEREELKVSVKLFLTEWDCSSIRSAVDMACLSLGVSQLDSVIIA----------------PPS 129

  Fly   140 SEDSNVSRATNWSQRNGKEGVAELKELYKTLEQYALKQQITQLGIADLDAAALEELHNSA-QVVP 203
            ..:......|:            |:.|::.||.....|:|..:|.:|||...||:|:|.| |:.|
Zfish   130 LPEGESQTLTH------------LQPLWQELESLVQSQKIAAIGTSDLDKTLLEQLYNWAQQIKP 182

  Fly   204 TIAQVNLSTCCVVPPELQEFCTAHDIQLNTHSDPELLLPVEQFDGLVPG---------YTIDWTL 259
            :..||||::|||:||:|..|....||||.|||||:.|:....|...|.|         :.::|.|
Zfish   183 SSNQVNLASCCVMPPDLTAFAKEFDIQLLTHSDPKELISAAGFQEAVQGSSQELQVDDWRLEWVL 247

  Fly   260 RYQVHVRCRGVLTAKGYIVGASRSS 284
            ||.:.|:.||::.||||||.|.:|:
Zfish   248 RYSIIVKSRGIIKAKGYIVHAKKSN 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GclmNP_001262845.1 Aldo_ket_red <79..>238 CDD:294321 52/159 (33%)
gclmXP_009302077.1 Aldo_ket_red <85..255 CDD:294321 62/197 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594897
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0656
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1557
Inparanoid 1 1.050 133 1.000 Inparanoid score I4583
OMA 1 1.010 - - QHG48881
OrthoDB 1 1.010 - - D1516283at2759
OrthoFinder 1 1.000 - - FOG0006260
OrthoInspector 1 1.000 - - oto40041
orthoMCL 1 0.900 - - OOG6_106072
Panther 1 1.100 - - LDO PTHR13295
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4224
SonicParanoid 1 1.000 - - X5208
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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