DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gclm and Gclm

DIOPT Version :10

Sequence 1:NP_732780.1 Gene:Gclm / 248194 FlyBaseID:FBgn0046114 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_059001.1 Gene:Gclm / 29739 RGDID:619871 Length:274 Species:Rattus norvegicus


Alignment Length:284 Identity:85/284 - (29%)
Similarity:137/284 - (48%) Gaps:47/284 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ISTGNIIATELGQRK----SNEELYDGLKITLHT-DSTAERVVVEKEIDELHGRVQRATQELTTR 73
            :.|||::.....::|    .:|||.|.::.||:. .|.....:|.:..|.|...:..|.:    :
  Rat    20 LQTGNLLNWGRLRKKCPSTHSEELRDCIQKTLNEWSSQISPDLVREFPDVLECTMSHAVE----K 80

  Fly    74 LTENGRNEISIGAKIFL-NRHSTESVNQAVEELLHILSVTHVDNVVLAYHPNAVATATPVATTKP 137
            :..:.|.|:.:.||:|: ..:|:.|...||:....:|.|..:|:|::|               .|
  Rat    81 INPDEREEMKVSAKLFIVGSNSSSSTRNAVDMACSVLGVAQLDSVIMA---------------SP 130

  Fly   138 PCSEDSNVSRATNWSQRNGKEGVAELKELYKTLEQYALKQQITQLGIADLDAAALEELHNSAQVV 202
            |..:..|:|             :..|:..::.||.....::|..:|.:|||...||:|:..|||.
  Rat   131 PIEDGVNLS-------------LEHLQPYWEELENLVQSKKIVAIGTSDLDKTQLEQLYQWAQVK 182

  Fly   203 PTIAQVNLSTCCVVPPELQEFCTAHDIQLNTHSDPELLLPVEQFDGLVPGYTID---------WT 258
            |...||||::|||:||:|..|....||||.||:||:.||....|...:.....|         |.
  Rat   183 PNSNQVNLASCCVMPPDLTAFAKQFDIQLLTHNDPKELLSEASFQEALQESIPDIEAQEWVPLWL 247

  Fly   259 LRYQVHVRCRGVLTAKGYIVGASR 282
            |||.|.|:.||::.:||||:.|.|
  Rat   248 LRYSVIVKSRGIIKSKGYILQAKR 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GclmNP_732780.1 AKR_SF <79..>235 CDD:444925 49/156 (31%)
GclmNP_059001.1 AKR_SF <86..>211 CDD:444925 32/125 (26%)

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