DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gclm and K07C5.2

DIOPT Version :9

Sequence 1:NP_001262845.1 Gene:Gclm / 248194 FlyBaseID:FBgn0046114 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_505658.1 Gene:K07C5.2 / 187089 WormBaseID:WBGene00010625 Length:301 Species:Caenorhabditis elegans


Alignment Length:168 Identity:36/168 - (21%)
Similarity:75/168 - (44%) Gaps:30/168 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RNEISIGAKI-FLNRHSTESVNQAVEELLHILSVTHVDNVVLAYHPNAVATATPVATTKPPCSED 142
            |.::.|..|: .||.::.|...:.:...|..|...:|| ::|.::|....|..         .:|
 Worm    78 REDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVD-LLLIHYPRDRDTGN---------DDD 132

  Fly   143 SNVSRATNWSQRNGKEGVAELKELYKTLEQYALKQQITQLGIADLDAAALEELHNSAQVVPTIAQ 207
            ..:    |.|:|         |.:::|||:.....::..:|:::.:...|.|:...|::.|.:.|
 Worm   133 YEI----NKSRR---------KIVWQTLEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQ 184

  Fly   208 VNLSTCCVVPPELQEFCTAHDIQLNTHS-----DPELL 240
            ..... .:..|.|::||..::|.:.::|     |.|:|
 Worm   185 YEYQP-YLTRPTLKKFCDLNNIVVQSYSSLCWGDKEIL 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GclmNP_001262845.1 Aldo_ket_red <79..>238 CDD:294321 34/164 (21%)
K07C5.2NP_505658.1 AKR_AKR1-5-like 20..282 CDD:381297 36/168 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0656
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.