DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gclm and C35D10.6

DIOPT Version :9

Sequence 1:NP_001262845.1 Gene:Gclm / 248194 FlyBaseID:FBgn0046114 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_498011.1 Gene:C35D10.6 / 175645 WormBaseID:WBGene00016443 Length:287 Species:Caenorhabditis elegans


Alignment Length:193 Identity:38/193 - (19%)
Similarity:81/193 - (41%) Gaps:40/193 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 RVVVEKEIDELHGRVQRATQELTTRLTENG--RNEISIGAKIFLNRHSTESVNQAVEELLHILSV 111
            |.:...::.....::.|..::|   |..||  |.:|.|.:|:..:....:...:::||.|..|.|
 Worm    40 RFIDTAQVYNNEAKIGRILEKL---LPANGLKREDIWITSKLAPSNAGVKKARESIEESLSNLKV 101

  Fly   112 THVDNVVLAYHPNAVATATPVATTKPPCSEDSNVSRATNWSQRNGKEGVAELKELYKTLEQYALK 176
            .::|.:::.:..:::.:..|.          :...|..:|:..  .|.:||.|            
 Worm   102 EYLDLLLIHWPGSSLKSENPA----------NKKLRVESWNVM--CEMMAEGK------------ 142

  Fly   177 QQITQLGIADLDAAALEELHNSAQVVPTIAQVNLSTCCVVP----PELQEFCTAHDIQLNTHS 235
              :..:|:::.:...||||...:.|||.:.||...     |    .:|.::|..::|....:|
 Worm   143 --LRSVGVSNFEICHLEELKKDSNVVPAVNQVEYH-----PHFHQDDLVKYCNENNIHFQAYS 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GclmNP_001262845.1 Aldo_ket_red <79..>238 CDD:294321 32/161 (20%)
C35D10.6NP_498011.1 AKR_DrGR-like 11..273 CDD:381362 38/193 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0656
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.