DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gclm and Akr1c3

DIOPT Version :9

Sequence 1:NP_001262845.1 Gene:Gclm / 248194 FlyBaseID:FBgn0046114 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_612519.1 Gene:Akr1c3 / 171516 RGDID:708428 Length:323 Species:Rattus norvegicus


Alignment Length:317 Identity:63/317 - (19%)
Similarity:117/317 - (36%) Gaps:99/317 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ITKKYQNVVISTGNII--------ATELGQRKSNEELYDGLKITL-----HTDSTAERVVVEKEI 56
            :..|.|.:.::.|:.|        |||...||.:.|   ..||.:     |.|.:          
  Rat     1 MNSKIQKMELNDGHSIPVLGFGTYATEENLRKKSME---STKIAIDVGFRHIDCS---------- 52

  Fly    57 DELHGRVQRATQELTTRLTENG---RNEISIGAKIFLNRHSTESVNQAVEELLHILSVTHVDNVV 118
             .|:...:...|.:.::: |:|   |.:|...:|::...|..|.|..::|..|..|::.:|| :.
  Rat    53 -HLYQNEEEIGQAIVSKI-EDGTVKREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVD-LY 114

  Fly   119 LAYHPNAVATATPVATTKP-----PCSEDSNVSRATNWSQRNGKEGVAELKELYKTLEQYALKQQ 178
            |.:.|         .:.||     |..|..|:...|           .:|.:.::.:|:......
  Rat   115 LIHFP---------VSLKPGDELLPQDEHGNLILDT-----------VDLCDTWEAMEKCKDAGL 159

  Fly   179 ITQLGIADLDAAALEELHNSAQVV--PTIAQVNLSTCC---VVPPELQEFCTAHDIQLNTH---- 234
            ...:|:::.:...||::.|...:.  |...||.    |   :...:|..:|..:||.|..:    
  Rat   160 AKSIGVSNFNRRQLEKILNKPGLKHRPVCNQVE----CHLYLNQSKLLAYCKMNDIVLVAYGALG 220

  Fly   235 ----------------SDPELLLPVEQF---DGLVPGYTIDWTLRYQVHVRCRGVLT 272
                            .||.|....:::   ..|:       .||||:.   ||::|
  Rat   221 TQRYKYCINEDTPVLLDDPILCTMAKKYKRTPALI-------ALRYQLE---RGIVT 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GclmNP_001262845.1 Aldo_ket_red <79..>238 CDD:294321 35/188 (19%)
Akr1c3NP_612519.1 AKR_AKR1C1-35 6..308 CDD:381334 62/312 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0656
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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