DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gclm and Gclm

DIOPT Version :9

Sequence 1:NP_001262845.1 Gene:Gclm / 248194 FlyBaseID:FBgn0046114 Length:285 Species:Drosophila melanogaster
Sequence 2:NP_032155.1 Gene:Gclm / 14630 MGIID:104995 Length:274 Species:Mus musculus


Alignment Length:284 Identity:85/284 - (29%)
Similarity:137/284 - (48%) Gaps:47/284 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ISTGNIIATELGQRK----SNEELYDGLKITLHT-DSTAERVVVEKEIDELHGRVQRATQELTTR 73
            :.|||::.....::|    .:|||.|.::.||:. .|.....:|.:..|.|...:..|.:    :
Mouse    20 LQTGNLLNWGRLRKKCPSTHSEELRDCIQKTLNEWSSQISPDLVREFPDVLECTMSHAVE----K 80

  Fly    74 LTENGRNEISIGAKIFL-NRHSTESVNQAVEELLHILSVTHVDNVVLAYHPNAVATATPVATTKP 137
            :..:.|.|:.:.||:|: ..:|:.|...||:....:|.|..:|:|::|               .|
Mouse    81 INPDEREEMKVSAKLFIVGSNSSSSTRSAVDMACSVLGVAQLDSVIMA---------------SP 130

  Fly   138 PCSEDSNVSRATNWSQRNGKEGVAELKELYKTLEQYALKQQITQLGIADLDAAALEELHNSAQVV 202
            |..:..|:|             :..|:..::.||.....::|..:|.:|||...||:|:..|||.
Mouse   131 PIEDGVNLS-------------LEHLQPYWEELENLVQSKKIVAIGTSDLDKTQLEQLYQWAQVK 182

  Fly   203 PTIAQVNLSTCCVVPPELQEFCTAHDIQLNTHSDPELLLPVEQFDGLVPGYTID---------WT 258
            |...||||::|||:||:|..|....||||.||:||:.||....|...:.....|         |.
Mouse   183 PNSNQVNLASCCVMPPDLTAFAKQFDIQLLTHNDPKELLSEASFQEALQESIPDIEAQDWVPLWL 247

  Fly   259 LRYQVHVRCRGVLTAKGYIVGASR 282
            |||.|.|:.||::.:||||:.|.|
Mouse   248 LRYSVIVKSRGIIKSKGYILQAKR 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GclmNP_001262845.1 Aldo_ket_red <79..>238 CDD:294321 51/159 (32%)
GclmNP_032155.1 AKR_SF <109..>211 CDD:412396 24/101 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849315
Domainoid 1 1.000 78 1.000 Domainoid score I8803
eggNOG 1 0.900 - - E1_COG0656
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1557
Inparanoid 1 1.050 114 1.000 Inparanoid score I4824
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48881
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006260
OrthoInspector 1 1.000 - - oto94574
orthoMCL 1 0.900 - - OOG6_106072
Panther 1 1.100 - - LDO PTHR13295
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4224
SonicParanoid 1 1.000 - - X5208
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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