DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gos28 and Gosr1

DIOPT Version :9

Sequence 1:NP_650739.2 Gene:Gos28 / 248102 FlyBaseID:FBgn0044871 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_446036.1 Gene:Gosr1 / 94189 RGDID:71093 Length:250 Species:Rattus norvegicus


Alignment Length:248 Identity:115/248 - (46%)
Similarity:162/248 - (65%) Gaps:18/248 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GGSSY-DVLRKQARSLENEIDLKLVAFSKI----GAGSGGGGSGGLGGVDTSPLLG----EHVFD 57
            |.|:| :.||||||.||||:|||||:|||:    ...|...|.......||:|||.    :.:|:
  Rat     4 GTSNYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFE 68

  Fly    58 SLSEEIEQMLEKLSSLNESMSD------LPASGAAAMHTLQRHREILQGYRQEFNKICANHTMRI 116
            :::.||||:|.:|:.:|:.|::      :|:..||.||||||||:|||.|..||:|..||. |.|
  Rat    69 TMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANF-MAI 132

  Fly   117 EREELLRGSGLATSSGSPSISGLNRR--EMYLKESGHLNSASHLVNDQINIAIETRDHLHAQRQA 179
            ...|.|.||.........|.||:|.|  |::|||..||.::..|:.:.|:||:.|::::.:||..
  Rat   133 RERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKENMTSQRGM 197

  Fly   180 FKRLQTRFNDISNRFPLISSLIQRINIKKRRDSLILGAVIGFCVILLLLYAFN 232
            .|.:.::.|.::||||.::|||||||::|||||||||.|||.|.||||||||:
  Rat   198 LKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLYAFH 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gos28NP_650739.2 SNARE 142..207 CDD:419871 27/66 (41%)
Gosr1NP_446036.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..59 6/21 (29%)
SNARE_GS28 160..225 CDD:277217 26/64 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336870
Domainoid 1 1.000 101 1.000 Domainoid score I6822
eggNOG 1 0.900 - - E1_KOG3208
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37977
Inparanoid 1 1.050 195 1.000 Inparanoid score I3741
OMA 1 1.010 - - QHG55290
OrthoDB 1 1.010 - - D1319902at2759
OrthoFinder 1 1.000 - - FOG0004151
OrthoInspector 1 1.000 - - oto96904
orthoMCL 1 0.900 - - OOG6_102989
Panther 1 1.100 - - LDO PTHR21094
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5179
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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