DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gos28 and GOS12

DIOPT Version :9

Sequence 1:NP_650739.2 Gene:Gos28 / 248102 FlyBaseID:FBgn0044871 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001189748.1 Gene:GOS12 / 819128 AraportID:AT2G45200 Length:257 Species:Arabidopsis thaliana


Alignment Length:250 Identity:88/250 - (35%)
Similarity:130/250 - (52%) Gaps:31/250 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SSYDVLRKQARSLENEIDLKLVAFSKIGAGSGGGGSGGL-------------GGVDT-SPLLGE- 53
            |.::.||::||.:|.::|:||.:::|:||....|.:..:             |.||| ||.:|. 
plant    11 SGWEELRREARKIEGDLDVKLSSYAKLGARFTQGDTDLVMNYEKVLKCVLVSGYVDTGSPTVGSG 75

  Fly    54 HVFDSLSEEIEQMLEKLSSLNESMSDLPASGA---AAMHTLQRHREILQGYRQEFNKICANHTMR 115
            ..:.|:..||:.:||||..:|:|||...||.|   :....|.|||:||..|.|||.:|..|....
plant    76 RSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSL 140

  Fly   116 IEREELLR------GSGLATSSGSPSISGLNRREMYLKESGHLNSASHLVNDQINIAIETRDHLH 174
            .|..|||.      ....|:.|.||.:..|..|     .|.| .|.|| ::|.|..|..||..|.
plant   141 REHAELLSSVRDDISEYKASGSMSPGVQVLRER-----ASIH-GSISH-IDDVIGQAQATRAVLG 198

  Fly   175 AQRQAFKRLQTRFNDISNRFPLISSLIQRINIKKRRDSLILGAVIGFCVILLLLY 229
            :||..|..:|.:..::.::||:|..|:..|..|:.||:|||.|||..|.:.|::|
plant   199 SQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIY 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gos28NP_650739.2 SNARE 142..207 CDD:419871 21/64 (33%)
GOS12NP_001189748.1 V-SNARE_C 168..232 CDD:289148 22/70 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I3385
eggNOG 1 0.900 - - E1_KOG3208
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37977
Inparanoid 1 1.050 114 1.000 Inparanoid score I2041
OMA 1 1.010 - - QHG55290
OrthoDB 1 1.010 - - D1319902at2759
OrthoFinder 1 1.000 - - FOG0004151
OrthoInspector 1 1.000 - - otm2838
orthoMCL 1 0.900 - - OOG6_102989
Panther 1 1.100 - - LDO PTHR21094
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5179
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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