DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gos28 and gosr1

DIOPT Version :9

Sequence 1:NP_650739.2 Gene:Gos28 / 248102 FlyBaseID:FBgn0044871 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_005157622.1 Gene:gosr1 / 100001316 ZFINID:ZDB-GENE-050417-133 Length:248 Species:Danio rerio


Alignment Length:247 Identity:120/247 - (48%)
Similarity:167/247 - (67%) Gaps:17/247 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GGSS--YDVLRKQARSLENEIDLKLVAFSKI--GAGSGGGGSGGLGGVDTSPLL----GEHVFDS 58
            ||:|  ::.||||||.||||:|||||:|||:  ...|...|..|....||:|||    .:.:|::
Zfish     3 GGNSNYWEDLRKQARQLENELDLKLVSFSKLCTSYSSSRDGRRGDSSSDTTPLLCNSTQDRMFET 67

  Fly    59 LSEEIEQMLEKLSSLNESMSDLPAS------GAAAMHTLQRHREILQGYRQEFNKICANHTMRIE 117
            :|.||||:|.||:.:|:.|::..::      .||.||||||||:|||.|..||:|..:|.....|
Zfish    68 MSVEIEQLLAKLTGVNDKMAEYTSTPGVTSLNAALMHTLQRHRDILQDYTHEFHKTKSNFMAIRE 132

  Fly   118 REELLRGSGLATSSGSPSISGLNRR--EMYLKESGHLNSASHLVNDQINIAIETRDHLHAQRQAF 180
            ||:|| ||.........|.||:|.|  |::|||..||.::..|::|.|:||:.|::::.:||...
Zfish   133 REDLL-GSVRKDIETYKSGSGVNNRRTELFLKEHEHLRNSDRLIDDTISIAMATKENMTSQRGLL 196

  Fly   181 KRLQTRFNDISNRFPLISSLIQRINIKKRRDSLILGAVIGFCVILLLLYAFN 232
            |.:|:|.|.::||||.|::||||||::|||||||||.|||.|.||||||||:
Zfish   197 KSIQSRVNTLANRFPAINNLIQRINLRKRRDSLILGGVIGICTILLLLYAFH 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gos28NP_650739.2 SNARE 142..207 CDD:419871 30/66 (45%)
gosr1XP_005157622.1 SNARE_GS28 158..223 CDD:277217 29/64 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576008
Domainoid 1 1.000 102 1.000 Domainoid score I6832
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37977
Inparanoid 1 1.050 201 1.000 Inparanoid score I3739
OMA 1 1.010 - - QHG55290
OrthoDB 1 1.010 - - D1319902at2759
OrthoFinder 1 1.000 - - FOG0004151
OrthoInspector 1 1.000 - - oto38851
orthoMCL 1 0.900 - - OOG6_102989
Panther 1 1.100 - - LDO PTHR21094
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R505
SonicParanoid 1 1.000 - - X5179
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.900

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