DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sts and CG7402

DIOPT Version :9

Sequence 1:NP_036793.2 Gene:Sts / 24800 RGDID:3783 Length:577 Species:Rattus norvegicus
Sequence 2:NP_649023.1 Gene:CG7402 / 39994 FlyBaseID:FBgn0036768 Length:579 Species:Drosophila melanogaster


Alignment Length:626 Identity:153/626 - (24%)
Similarity:233/626 - (37%) Gaps:162/626 - (25%)


- Green bases have known domain annotations that are detailed below.


  Rat     9 LLLSQLNFLCAARPGPG----PNFLLIMADDLGIGDLGCYGNRTLRTPHIDRLALEGVKLTQHLA 69
            |:|..::.:.:...|.|    ||.::|:.||:|:.|:..:|:..:.||:||.||..|:.|.:|. 
  Fly     7 LVLLVVSSILSLAYGSGYSTKPNIVIILIDDMGMNDVSFHGSNQILTPNIDALAYNGILLNKHY- 70

  Rat    70 AAPLCTPSRAAFLTGRYPVRSGMASHGRLGVFLFSASSGGLPPNEVTFAKLLKGQGYTTGLVGKW 134
            ...|||||||..|||:||:.:|| .|    ..:.:....|||..|....::.:..||:|.|||||
  Fly    71 VPNLCTPSRATLLTGKYPIHTGM-QH----FVIITDEPWGLPQRERLMPEIFRDAGYSTHLVGKW 130

  Rat   135 HLGLSCQAASDFCHHPGRHGFDRFLGTPTTNLRDCKPGGGTVFGSAQQVFVVLPMNILGAVLLAM 199
            |||...:..:     |...|||...|                                       
  Fly   131 HLGFWRKDLT-----PTMRGFDHHFG--------------------------------------- 151

  Rat   200 ALARWAGLARPPGWVFGVTVAAMAAVGGAYVAFLYH---FRPANCFLMADFTITQQP-TDYKG-- 258
                                     ....|:.:..|   ....|.....||....:| .:..|  
  Fly   152 -------------------------YYNGYIDYYDHQVRMLDRNYSAGLDFRRDLEPCPEANGTY 191

  Rat   259 LTQRLASEAGDFL-RRNRDTPFLLFLSFMHVHTAHFANPEFAGQS-----------LHGAYGDAV 311
            .|:...|||...: :.::..|..:.||.:.|||.:..:|..|.:.           ....|...:
  Fly   192 ATEAFTSEAKRIIEQHDKSKPLFMVLSHLAVHTGNEDSPMQAPEEEVAKFPHIRDPKRRTYAGMI 256

  Rat   312 EEMDWAVGQVLATLDKLGLANNTLVYFTSDHGAHVEELGPNGERHGGSNGIYRGGKANTWEGGIR 376
            ..:|.:|.|.:..|...|:.||:::...||:||....:..|    .|||..|||.|.:.||||||
  Fly   257 SSLDKSVAQTIGALKDNGMLNNSIILLYSDNGAPTIGIHSN----AGSNYPYRGQKESPWEGGIR 317

  Rat   377 VPGLVRWPGVIVPGQEVEEPTSNMDVFPTVARLAGAELPTDRVIDGRDLMPLLLGHVQHSEHEFL 441
            ..|.:..|.:...|....:....:|..||:|..||..||.|..:||.:|.|:|.|:.:......:
  Fly   318 SAGALWSPLLKERGYVSNQAIHAVDWLPTLAGAAGVSLPQDLPLDGINLWPMLSGNEEPKPRTMI 382

  Rat   442 ------FHYCNAYLSAVRWRPHNSSSV------WKAFYFTPNFDPPGSNGCFSTHVCMCH----- 489
                  |.|.:.....:::  .|.||.      |.....|...||.|.:  :..||....     
  Fly   383 HVLDEVFGYSSYMRDTLKY--VNGSSFKGRYDQWLGELETNEDDPLGES--YEQHVLASDVQSLL 443

  Rat   490 GH-------------HVTHHDPPL-------------------LFDIARDPRER------HPLTP 516
            |:             ..|...||:                   .||:|:||.||      :||..
  Fly   444 GNRGLTKDRIRQMRSEATETCPPIEGQNPLESHFKCEPLKAPCFFDLAKDPCERYNLAQMYPLQL 508

  Rat   517 ETEPRHGEILRNMDAAARAHVATLEEAPNQLSMSNVAWKPW 557
            :......|.:|. .|...|.|...:...|. :..|..|:.|
  Fly   509 QQLADELEQIRK-TAIPSARVPHSDSRANP-TFHNGNWEWW 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StsNP_036793.2 ALP_like 26..548 CDD:419962 146/594 (25%)
CG7402NP_649023.1 PRK13759 25..459 CDD:237491 128/516 (25%)
4-S 28..436 CDD:293753 127/490 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351148
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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