Protein Alignment Serpina3c and Spn88Eb

DIOPT Version :9

• Sequence 1: NP_036789.2
• Gene: Serpina3c / 24794
• RGDID: 2972
• Length: 416
• Species: Rattus norvegicus
• Sequence 2: NP_650427.1
• Gene: Spn88Eb / 41829
• FlyBaseID: FBgn0038299
• Length: 426
• Species: Drosophila melanogaster
• Alignment Length: 394
• Identity: 102/394 - (25%)
• Similarity: 182/394 - (46%)
• Gaps: 41/394 - (10%)

  Rat    51 DFTLSLYKKLALRNPDKNVVFSPLSISAALAILSLGAKDSTMEEILEGLKFNLTEITEEEIHQGF 115
            ||:|:|.|::....|..|:.|||.|...||.:....:.:.|..|:.:.|..... :.::::...:
  Fly    40 DFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLGWA-LNKQQVLVSY 103

  Rat   116 GHLLQRLSQPEDQ-------AEINTGSALFIDKEQPILSEFQEKTRALYQAEAFVADFKQCNE-A 172
                 .|:|.:|:       .|:::.:.:|:|:...:.::|   ...||.|...: |||...| .
  Fly   104 -----TLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKF---NTLLYGATKEL-DFKNDPETG 159

  Rat   173 KKFINDYVSNQTQGKIAELFS--DLDERTSMVLVNYLLFKGKWKVPFNPNDTFESEFYLDEKRSV 235
            .|.|||:::::|..:|.::.|  ::...|.:||.|....||:|...|...:|....|:::|:...
  Fly   160 LKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQE 224

  Rat   236 KVPMMKIKDLTTPYVRDEELSCSVLELKY----------------TGNASALFILPDQGK--MQQ 282
            .|.||. |........||.|...:::|.|                ..:.|.:.|||:..|  :.:
  Fly   225 MVYMMH-KTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNKISLNR 288

  Rat   283 VESSLQPETLKKWKDSLRPRIISELRMPKFSISTDYNLEEVLPELGIRKIFSQQADLSRITGTK- 346
            |.|.|..:::|||.:...|:.| ||.:|||.......|..:|..:|:..:|::.|....:|...
  Fly   289 VISRLNADSVKKWFERALPQKI-ELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPI 352

  Rat   347 NLHVSQVVHKAVLDVDETGTEGAAATAVTAALKSLPQTVPLLNFNRPFMLVITDNNGQSVFFMGK 411
            :|.:....|.|.:.|||.|:..||||.:..:..|........|.|.||:.:|.|....::.|.|.
  Fly   353 SLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAGV 417

  Rat   412 VTNP 415
            .::|
  Fly   418 YSDP 421

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Serpina3c	NP_036789.2	SERPIN	54..415	CDD:214513	99/389 (25%)
		RCL	365..392		7/26 (27%)
Spn88Eb	NP_650427.1	SERPIN	37..418	CDD:238101	101/389 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11461
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.100