DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc4a3 and Ndae1

DIOPT Version :9

Sequence 1:NP_058745.2 Gene:Slc4a3 / 24781 RGDID:3712 Length:1227 Species:Rattus norvegicus
Sequence 2:NP_723263.2 Gene:Ndae1 / 34005 FlyBaseID:FBgn0259111 Length:1190 Species:Drosophila melanogaster


Alignment Length:1262 Identity:412/1262 - (32%)
Similarity:599/1262 - (47%) Gaps:297/1262 - (23%)


- Green bases have known domain annotations that are detailed below.


  Rat    37 DLGKTLAVSRFGDLISKTPAWDPEKPSRSYSERDFEFHR-HTSHHTHHPLSARLPPPHKLRRLPP 100
            :|..|:..|...|...|.|....|..::.::|.|||.|| ||.:...|               .|
  Fly     9 ELPWTMNSSSGDDEAPKDPRTGGEDFTQQFTENDFEGHRAHTVYVGVH---------------VP 58

  Rat   101 TSARHARRKRKKEKTSAPPS-----------EGTPPIQEEGGAGAEEEEEEEEEEEGESEAEPVE 154
            ...||::|:||... |.|..           .|:..:  .||||.:...|:::|.|     .||.
  Fly    59 GGRRHSQRRRKHHH-SGPGGGGGGGGGGGSIGGSGSV--GGGAGKDNVSEKQQEVE-----RPVT 115

  Rat   155 PPPPGPPQKAKFSIGSDEDDSPGLSIKAPCAKALPSVGLPSDQSPQRSGSSPSPRARASRISTEK 219
            |    |.|:.:|.:|.|.||...:|                                        
  Fly   116 P----PAQRVQFILGEDVDDGTHVS---------------------------------------- 136

  Rat   220 SRPWSPSASYDLRERLCPGSALGNPGPEQRVPTDEAEAQMLGSADLDDMKSHRLEDNPGVRRHLV 284
                                                                             
  Fly   137 ----------------------------------------------------------------- 136

  Rat   285 KKPSRIQGGRGSPSGLAPILRRKKKKKKLDRRPHEVFVELNELMLDRSQEPHWRETARWIKFEED 349
                                             |.:|.|:. :::....|..|:|||||||||||
  Fly   137 ---------------------------------HPLFSEMG-MLVKEGDEIEWKETARWIKFEED 167

  Rat   350 VEEETERWGKPHVASLSFRSLLELRRTIAQGAALLDLEQTTLPGIAHLVVETMIVSDQIRPEDRA 414
            |||...||.|||||:||..||.||||.:..|:.:||:|...|..:|.||.:.|:.:..:.|..:.
  Fly   168 VEEGGNRWSKPHVATLSLHSLFELRRLLVNGSVMLDMEAQNLEVMADLVCDHMVSAGTLPPGVKD 232

  Rat   415 SVLRTLLLKHSHPNDDKDSGFFP--------RNPSSSSVNSVLGNHHPTPSHGPDGAVPTMADDL 471
            .|...||.:|.|.::.......|        ||.|||. .....:.|..|:..    :.::.:|:
  Fly   233 KVKDALLRRHRHQHEYAKKTRLPIIRSLADMRNHSSSK-KKKSNSKHSRPAQN----LSSITEDM 292

  Rat   472 GEPAPLWPHDPDAKEKPLHMPGG------DGHRGKSLKLLEKIPEDAEATVVLVGSVPFLEQPAA 530
            .:         ....:.:..||.      ..|:|.: ..:.|||..|||:.:|||.|.|||:..:
  Fly   293 VK---------SPSNQSMARPGSGTELSEQQHKGNT-HFMRKIPPGAEASNILVGEVDFLERTLS 347

  Rat   531 AFVRLSEAVLLESVLEVPVPVRFLFVMLGPSHTSTDYHELGRSIATLMSDKLFHEAAYQADDRQD 595
            .|:|||:||:|..:.|||||.||:|::|||..:.:::||:||::||||||::|||.||:|..|..
  Fly   348 CFIRLSQAVVLGDLTEVPVPTRFVFILLGPPGSQSNFHEIGRAMATLMSDEIFHEVAYRARKRDH 412

  Rat   596 LLGAISEFLDGSIVIPPSEVEGRDLLRSVAAFQRELLRKR------REREQTKVEMTTRGGYVAP 654
            ||..:.||||...|:||.|.:....:...||...:.:|||      .|.::.:.|...|      
  Fly   413 LLSGVDEFLDAVTVLPPGEWDPTIRIEPPAAIPSQEVRKRPPELPKEEVDEEEEEARLR------ 471

  Rat   655 GKELSLEMGGSEATSEDDPLQRTGSVFGGLVRDVKRRYPHYPSDLRDALHSQCVAAVLFIYFAAL 719
                           |::.|.|||.:||||:.|:||:.|.|.||.:|||..||||:.:|:|||.|
  Fly   472 ---------------EENGLSRTGRLFGGLINDIKRKAPWYISDYKDALSMQCVASWIFLYFACL 521

  Rat   720 SPAITFGGLLGEKTEGLMGVSELIVSTAVLGVLFSLLGAQPLLVVGFSGPLLVFEEAFFKFCRAQ 784
            ||.|||||||.|.|...|...|.:||..|.|:.:.....|||.::|.:||:||||...::||...
  Fly   522 SPIITFGGLLAEATGKHMAAMESLVSGFVCGMGYGFFSGQPLTILGSTGPVLVFESIIYEFCLKM 586

  Rat   785 DLEYLTGRVWVGLWLVVFVLALVAAEGSFLVRYISPFTQEIFAFLISLIFIYETFHKLYKVFTEH 849
            ..:|:|.|.|:|:|:....:.|.|.:.|.||.||:.||:|.||.||:.||||:....:..:... 
  Fly   587 GWDYMTFRFWIGMWVAGICIVLTAIDASALVCYITRFTEENFATLIAFIFIYKAIENVMVIGKN- 650

  Rat   850 PLLPFYPPEEAL-----EPGLELNSSAL------------------------PPTEGPPGPRNQP 885
                 :|..:.:     .|.:..|:|.:                        ||||         
  Fly   651 -----FPVNQGIYDCVCTPPIGSNASVIDYAKYNWDSCESYNGTLVGGDCGTPPTE--------- 701

  Rat   886 NTALLSLILMLGTFLIAFFLRKFRNSRFLGGKARRVIGDFGIPISILVMVLVDYSITDTYTQKLT 950
            |..|:|::|..|||||:..|::|:|:.|.....|:.|.||.:.|:|..|...|||: ...||||.
  Fly   702 NVFLMSVVLCAGTFLISTVLKEFKNALFFPSIVRQYISDFSVLIAIFAMSFFDYSL-GVPTQKLE 765

  Rat   951 VPTGLSVTSPHKRTWFIPPLGSARPFPPWMMVAAAVPALLVLILIFMETQITALIVSQKARRLLK 1015
            ||..|..|. ..|.|.|||.....|:  |..:.|..||||..|||||:.||||:||::|..:|.|
  Fly   766 VPNELKPTL-STRGWLIPPFVEKNPW--WSAIIAVFPALLGTILIFMDQQITAVIVNRKENKLKK 827

  Rat  1016 GSGFHLDLLLIGSLGGLCGLFGLPWLTAATVRSVTHVNALTVMRTAIAPGDKPQIQEVREQRVTG 1080
            |.|:||||.::..|..:|.:.||||..||||.|:.|||:|.:.....|||:|||...|||||||.
  Fly   828 GCGYHLDLFILSILIAICSMMGLPWFVAATVLSINHVNSLKLESECSAPGEKPQFLGVREQRVTH 892

  Rat  1081 VLIASLVGLSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIFMPAKHHPEQPYVTKV 1145
            :||...:|:|:::..:|..||:.||||:||||||.||.|:|...|:|::|||||:.|:..::.:|
  Fly   893 ILIFLTIGVSVLLTPLLGNIPMPVLFGVFLYMGVASLKGLQFFDRILIMFMPAKYQPDYMFLRQV 957

  Rat  1146 KTWRMHLFTFIQLGCIALLWVVKS-TVASLAFPFLLLLTVPLRRCLLPRLFQDRELQALDSEDAE 1209
            ...|:||||.|||.|:.:||::|| :..|:.||.:|::.:.:|:. |..:|..|||:.||  |..
  Fly   958 PIKRVHLFTMIQLACLIILWLIKSFSQTSILFPLMLVVMIGIRKA-LDLVFTRRELKILD--DIM 1019

  Rat  1210 PNFDE----------DGQDEYNELHMP 1226
            |...:          |.:|.::: |.|
  Fly  1020 PEMTKRAAADDLHKLDAEDNHHQ-HPP 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc4a3NP_058745.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..255 43/229 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..312 0/25 (0%)
ae 321..1226 CDD:273290 367/964 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 428..497 11/82 (13%)
Membrane (anion exchange) 708..1227 220/559 (39%)
Ndae1NP_723263.2 ae 140..1016 CDD:273290 360/932 (39%)
Band_3_cyto 167..435 CDD:284893 105/282 (37%)
HCO3_cotransp 476..968 CDD:279322 214/510 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335803
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1172
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265068at2759
OrthoFinder 1 1.000 - - FOG0000136
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100185
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X102
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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