DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc2a1 and CG1213

DIOPT Version :9

Sequence 1:NP_620182.1 Gene:Slc2a1 / 24778 RGDID:3704 Length:492 Species:Rattus norvegicus
Sequence 2:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster


Alignment Length:488 Identity:141/488 - (28%)
Similarity:213/488 - (43%) Gaps:62/488 - (12%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MEPSSKKVTGRLMLAVGGAVLGSLQFGYNTGVINAPQKVIEEFYNQTWNHRYGESI--------- 56
            |.|...| :||:.:|...|.|.:...|...|                |....|..:         
  Fly    32 MSPEPVK-SGRIFMAAVAANLSAFVVGTTLG----------------WTSPIGPKLKSEDTSDSP 79

  Rat    57 ---PSTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKS 118
               |.|:....|..|  :.:||.::..|..|...:|.||: .:|:.:.|.||.|  .|.:.:...
  Fly    80 LSRPITSDEDAWISS--LIAVGALVAPFVAGPMADRIGRK-WVLLSSSLFFVLA--FGLNMVASE 139

  Rat   119 FEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNA 183
            ..:|.:.|.|.|...|......||||||:|...:|||.|:|.||.||.|||.....| ..:...|
  Fly   140 VWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIG-PYVSYQA 203

  Rat   184 DLWPLLLSVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRGTA-----DVTRDLQE 243
            ..|    ..|.:|.:...:.. ..||||.| ...:..::.|...|:.|||.:     |...::|.
  Fly   204 LQW----CCIVVPVVFDLVFY-MMPESPYF-FAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQA 262

  Rat   244 MKEEGRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGV-QQPV 307
            ..||.    ...|.|:::||::...|:.:.|...|...|||||||.|.:.|.|||..|.. ..|.
  Fly   263 NVEEA----MASKGTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPA 323

  Rat   308 YATIGSGIVNTAFTVVSLFVVERAGRRTLHL-------IGLAGMAGCAVLMTIALALLEQLPWMS 365
            .|||..|.|....:.::..|.:|.||:.:.|       ||||.: |....|.:....:..:.||.
  Fly   324 IATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAAL-GAFFYMQLVKGDISSVVWMP 387

  Rat   366 YLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCG 430
            ..::: |:..|  :..|.||:||.::.|:|....:..|.:|...:.||..|:|...:..::.|..
  Fly   388 VPALI-IYNIV--YCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGS 449

  Rat   431 PYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEI 463
            .|.|.:|.|.:|:.|.|..|.|.||||.:..:|
  Fly   450 YYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc2a1NP_620182.1 MFS_GLUT_Class1 14..458 CDD:340989 134/468 (29%)
Monosaccharide binding. /evidence=ECO:0000250|UniProtKB:P11166 282..288 5/5 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 468..492
CG1213NP_001246937.1 SP 42..482 CDD:273317 135/475 (28%)
MFS 47..460 CDD:119392 125/448 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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