DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scnn1b and ppk26

DIOPT Version :9

Sequence 1:NP_036780.1 Gene:Scnn1b / 24767 RGDID:3640 Length:638 Species:Rattus norvegicus
Sequence 2:NP_648125.3 Gene:ppk26 / 38835 FlyBaseID:FBgn0035785 Length:597 Species:Drosophila melanogaster


Alignment Length:632 Identity:123/632 - (19%)
Similarity:222/632 - (35%) Gaps:179/632 - (28%)


- Green bases have known domain annotations that are detailed below.


  Rat    13 RLQKGPGY-TYKELLVWYCNNTNTHGPKRIICEGPKKKAM-----WF--LLTLLFACLVC----- 64
            :::.|.|: ..|.::..||:.|..||.:.:   |.||:.:     |.  |:..:|.|:..     
  Fly    57 QIKYGSGFQAAKAIIHEYCDYTTIHGIRYL---GEKKRPLLERLFWISVLVLSVFTCVKLTLNIW 118

  Rat    65 --WQWGVFIQTYLS-----WEVSVSLSMGFKTMNFPAVTVCNSSP-----FQYSKVKHLLKDLYK 117
              |.....|.::..     |::.           |||||||..:.     |.::...|.::|...
  Fly   119 DKWNNNPVIVSFAEKSTPVWQIP-----------FPAVTVCPETKTRREIFNFTDSYHQVRDFQS 172

  Rat   118 LMEAVLD-----KILAPKSSHTNTTSTLNFTIWNHT--PLVLID---ERNPDHPVVLNLFGDSHN 172
            .:..::|     |.|....|........:.|:.|.|  .:.:||   |.:|.       |.|::.
  Fly   173 NVSGIVDLSDKQKGLYGAVSQVCEPHLHDVTLGNKTRRGMEIIDALTEVSPH-------FDDTYL 230

  Rat   173 SSNPAPGSTCNAQGCKVAMRLCSANGTVCTFRNFTSATQAVTEWYILQATNIFSQVLPQDLVGMG 237
            :                           |.:||..           ::.::||.:.:.:|  |:.
  Fly   231 N---------------------------CKWRNSP-----------VKCSDIFHKFVTED--GVC 255

  Rat   238 YAPDRIILACLFGTEPCSHRNFTPIFYPDYGNCYIFNWGMTEKALPSAN----------PGTEFG 292
            ::.:.:..|.:|..|     ...|.|.....|....:|.:.:....||:          ||...|
  Fly   256 FSFNSLSPAEIFRAE-----GIIPDFIFREENRLSMDWNVEDGYSASADTSPYPNRVLGPGARAG 315

  Rat   293 LKLILDIGQEDYVPFL-ASTAGARLMLHE-------QRTY---PFIREEGIYAMAGTETSIGVLL 346
            |.|.:...:.|:.... ....|.:::||.       .:.|   ||.:|    .:......|....
  Fly   316 LYLFMGGAEIDFDDMCRGPVQGFKILLHTPGDVAQVSKQYFRIPFDQE----VLISIRPKIITTS 376

  Rat   347 DKLQGKGEPYSP----CTMNGS-DVAIQNLYSDYNTTYSIQACLHSCFQDHMIHNCSCGHYLYPL 406
            |.|    :.|.|    |..... ::...|:||..|       |...|..:..:..|.|..:..|.
  Fly   377 DGL----KHYEPNRRQCYFQKERELRYFNIYSQSN-------CELECLANFTLTKCGCVKFSMPR 430

  Rat   407 PAGEKYCNNRDFPDWAYCYLSLQMSVVQRETCLSM--------------CKESCNDTQYKMTISM 457
            ......|.:....    ||...:..::.||....:              |..||....|:..||.
  Fly   431 NVNMPVCGDASLK----CYNQAEDELLLREFTQGLVNAGENTRGETECNCLPSCTSIAYEAEISQ 491

  Rat   458 ADWPSEASEDWILHVLSQERDQSSNITLSRKG--IVKLNIYFQEFNYRTIEESPANNIVWLLSNL 520
            ||:..:.       |::.:..:.......|:|  :.:::|:|:|..:.|...|........|:|.
  Fly   492 ADFDYKT-------VINTDSPEGKEEQSKRQGMKMSRVSIFFKEAQFLTSRRSELYGTTDFLANC 549

  Rat   521 GGQFGFWMGGSVLCLIEFGEIIIDFIWITVIKLVASCKGLRRRRPQR 567
            ||..|.:||.|:|.::|       .|:...::|:::   ||.||..|
  Fly   550 GGLLGLFMGVSMLSIVE-------LIYFCTVRLISN---LRMRRKTR 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scnn1bNP_036780.1 ENaC 21..621 CDD:273304 121/623 (19%)
deg-1 29..538 CDD:273309 112/584 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..620
ppk26NP_648125.3 ASC 74..570 CDD:279230 114/594 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6095
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8907
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

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