DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56f and Obp57c

DIOPT Version :9

Sequence 1:NP_725926.1 Gene:Obp56f / 246668 FlyBaseID:FBgn0043533 Length:125 Species:Drosophila melanogaster
Sequence 2:NP_611481.1 Gene:Obp57c / 37311 FlyBaseID:FBgn0034509 Length:149 Species:Drosophila melanogaster


Alignment Length:139 Identity:31/139 - (22%)
Similarity:60/139 - (43%) Gaps:35/139 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKVFLLFIF-ISAIWLQAF-CMKSSEKIKACL------KRQLGYTITENTKFDAKEDSLQS---- 53
            :|::|:.|. :|.:.:|:. .::.:..:..||      :.:....|..|:   ::||.|::    
  Fly     2 LKLWLICILTVSVVSIQSLSLLEETNYVSDCLASNNISQAEFQELIDRNS---SEEDDLENTDRR 63

  Fly    54 -KCFYHC------LLEVKGVIANDAISSEQPRKVLEKKYGITDTDELEKAEEKCHSI--KASGKC 109
             |||.||      ||:..|.:..|.|...:|           .:|||.:....|..|  :....|
  Fly    64 YKCFIHCLAEKGNLLDTNGYLDVDKIDQIEP-----------VSDELREILYDCKKIYDEEEDHC 117

  Fly   110 ELGYEILKC 118
            |..::::.|
  Fly   118 EYAFKMVTC 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56fNP_725926.1 PBP_GOBP <52..120 CDD:279703 19/80 (24%)
Obp57cNP_611481.1 PhBP 28..131 CDD:214783 26/113 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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