DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56f and Obp56a

DIOPT Version :9

Sequence 1:NP_725926.1 Gene:Obp56f / 246668 FlyBaseID:FBgn0043533 Length:125 Species:Drosophila melanogaster
Sequence 2:NP_611442.1 Gene:Obp56a / 37264 FlyBaseID:FBgn0034468 Length:139 Species:Drosophila melanogaster


Alignment Length:102 Identity:28/102 - (27%)
Similarity:48/102 - (47%) Gaps:14/102 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SEKIKACLKRQLGYTITENTKFDAKE---DSLQSKCFYHCLLEVKGVIANDAISSEQPRKVLEKK 84
            :|::|        .|..|..|.:||:   .:...|||.:|..|..|.:.:..:   |...||||.
  Fly    40 AEEVK--------LTEEEKAKVNAKDFNNPTENIKCFANCFFEKVGTLKDGEL---QESVVLEKL 93

  Fly    85 YGITDTDELEKAEEKCHSIKASGKCELGYEILKCYQS 121
            ..:...::.:.|.|||.:||...||:...::..|::|
  Fly    94 GALIGEEKTKAALEKCRTIKGENKCDTASKLYDCFES 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56fNP_725926.1 PBP_GOBP <52..120 CDD:279703 20/67 (30%)
Obp56aNP_611442.1 PBP_GOBP 24..128 CDD:279703 26/98 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006711
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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