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Protein Alignment Obp56f and Obp28a
DIOPT Version :10
| Sequence 1: | NP_725926.1 |
Gene: | Obp56f / 246668 |
FlyBaseID: | FBgn0043533 |
Length: | 125 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_523505.1 |
Gene: | Obp28a / 34031 |
FlyBaseID: | FBgn0011283 |
Length: | 143 |
Species: | Drosophila melanogaster |
| Alignment Length: | 129 |
Identity: | 29/129 - (22%) |
| Similarity: | 47/129 - (36%) |
Gaps: | 29/129 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 278 GLRLVERK----------RFEEVFDENSSRKQGLLEKMQALEMYPPPYGRFNGDDQRKEPEQYQH 332
|..|::|| |..::.|.:|..:....|...|:|........|: ::...|.|..::
Fly 91 GKPLLQRKKNPSNPSKKSRLLQICDSSSDEEADGREAGAAIEQRSERLVEFD-EETPMETEIEEN 154
Fly 333 AEEYGRQMS--------------NRHQFRVGTLSQKEWEAATLYLFFAFQKMKTSYD----ANG 378
.:|.||:.| ||::.:|..|..|.:.....||.........|.| |||
Fly 155 KKEEGRKPSLSPEKPVENDSNSVNRNRGKVKKLVTKTYTDEEGYLITVKDYEMVSEDDESTANG 218
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Obp56f | NP_725926.1 |
PBP_GOBP |
<49..120 |
CDD:460193 |
|
| Obp28a | NP_523505.1 |
PBP_GOBP |
24..134 |
CDD:460193 |
10/42 (24%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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