DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56f and Obp19d

DIOPT Version :9

Sequence 1:NP_725926.1 Gene:Obp56f / 246668 FlyBaseID:FBgn0043533 Length:125 Species:Drosophila melanogaster
Sequence 2:NP_523421.2 Gene:Obp19d / 33040 FlyBaseID:FBgn0011280 Length:150 Species:Drosophila melanogaster


Alignment Length:100 Identity:22/100 - (22%)
Similarity:44/100 - (44%) Gaps:25/100 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IKACLKRQLGYTITENTKFDAKEDSLQSKCFYHCLLEVKGVIANDAISSEQPRKVLEKKYGITDT 90
            ::||:.::| ..:.|:.|.: ||         |.:..||.:..:||...:.|.:|:.|      .
  Fly    69 LRACVMKKL-QIMDESGKLN-KE---------HAIELVKVMSKHDAEKEDAPAEVVAK------C 116

  Fly    91 DELEKAEEKCHSIKASGKCELGYEILKCYQSITKH 125
            :.:|..|:.|.:..|..:|        .|:.:.:|
  Fly   117 EAIETPEDHCDAAFAYEEC--------IYEQMKEH 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56fNP_725926.1 PBP_GOBP <52..120 CDD:279703 13/67 (19%)
Obp19dNP_523421.2 PBP_GOBP 23..139 CDD:279703 21/94 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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