DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56i and Obp56h

DIOPT Version :9

Sequence 1:NP_725929.1 Gene:Obp56i / 246667 FlyBaseID:FBgn0043532 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001188979.1 Gene:Obp56h / 37271 FlyBaseID:FBgn0034475 Length:134 Species:Drosophila melanogaster


Alignment Length:129 Identity:26/129 - (20%)
Similarity:50/129 - (38%) Gaps:15/129 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHFFTCCALLLVVVTLPTCFVQAGPIKDQCMAAAGITAQDVANRHET---DDPGHSVKCFFRCFL 62
            |.|...|..|...:::..|......|..|||....:|..|:.....:   .....::||:.:|.:
  Fly     1 MKFTLFCIALAAFLSMGQCNPDFRQIMQQCMETNQVTEADLKEFMASGMQSSAKENLKCYTKCLM 65

  Fly    63 ENIGIIADNQIIPGAFDRVLGHIVTAEAVERMEA------TCNMIKSETSHDESCEFAWQISEC 120
            |..|.:.:.|....|....|.::  .:..::|:.      .|..||.    ...|:.|::::.|
  Fly    66 EKQGHLTNGQFNAQAMLDTLKNV--PQIKDKMDEISSGVNACKDIKG----TNDCDTAFKVTMC 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56iNP_725929.1 PBP_GOBP 25..121 CDD:279703 21/105 (20%)
Obp56hNP_001188979.1 PhBP 26..128 CDD:214783 21/104 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113266at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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