DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56i and Obp19b

DIOPT Version :9

Sequence 1:NP_725929.1 Gene:Obp56i / 246667 FlyBaseID:FBgn0043532 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_608391.2 Gene:Obp19b / 33038 FlyBaseID:FBgn0031110 Length:163 Species:Drosophila melanogaster


Alignment Length:102 Identity:26/102 - (25%)
Similarity:43/102 - (42%) Gaps:28/102 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DDPGHSVKCFFRCFLENIGIIADNQI----------IPGAF-DRVLGHIVTAEAVERMEATCN-M 100
            :|..|..|||..|.||...::.::|:          |...| ||       .:...|:..||| .
  Fly    72 EDAKHETKCFRHCMLEQFELMPEDQLQYNEDKTVDMINMMFPDR-------EDDGRRIVKTCNEE 129

  Fly   101 IKSETSHDESCEFAWQISECY------EGVRLSDVKK 131
            :|:|   .:.||.|..|:.|.      .|.::.::|:
  Fly   130 LKAE---QDKCEAAHGIAMCMLREMRSSGFKIPEIKE 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56iNP_725929.1 PBP_GOBP 25..121 CDD:279703 23/84 (27%)
Obp19bNP_608391.2 PBP_GOBP 38..150 CDD:279703 24/87 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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