DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obp51a and Obp19c

DIOPT Version :9

Sequence 1:NP_725436.1 Gene:Obp51a / 246666 FlyBaseID:FBgn0043530 Length:117 Species:Drosophila melanogaster
Sequence 2:NP_608392.1 Gene:Obp19c / 33039 FlyBaseID:FBgn0031111 Length:175 Species:Drosophila melanogaster


Alignment Length:100 Identity:23/100 - (23%)
Similarity:47/100 - (47%) Gaps:14/100 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ECAKKLGITPDY-----FENFPHSSRVKCFYHCQMEKLEII-ANGVVTPFDLKVLNISPESYDKY 85
            ||.:||.:..|.     ..|  .|.:.||...|.::|:::: |:..:....::.|.......:|.
  Fly    68 ECIQKLQLPRDQRPLGKVTN--PSEKEKCLVECVLKKIKLMDADNKLNVGQVEKLTSLVTQDNKM 130

  Fly    86 GVKV-----KPCLK-LSHRDKCELGYLVFQCLKRE 114
            .:.|     :.|.: :|.::.||:.:|..||:.|:
  Fly   131 AIAVSSSMAQACSRGISSKNPCEVAHLFNQCISRQ 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp51aNP_725436.1 PBP_GOBP 25..114 CDD:279703 22/98 (22%)
Obp19cNP_608392.1 PhBP 65..164 CDD:214783 22/97 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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