DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30496 and glmnb

DIOPT Version :10

Sequence 1:NP_724595.1 Gene:CG30496 / 246652 FlyBaseID:FBgn0050496 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_009300664.1 Gene:glmnb / 100170791 ZFINID:ZDB-GENE-080723-14 Length:591 Species:Danio rerio


Alignment Length:631 Identity:133/631 - (21%)
Similarity:249/631 - (39%) Gaps:116/631 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DGVRMLFQSAQESEKNT------RLLPHIAMDLYHDVCLENISDEVNSQEPELFDCSDELLKLLA 91
            ||..:|.....|:.|:.      .|:|.:..::     |.|....|:.|         .:|..|.
Zfish    39 DGTLLLNFIKDEANKHIVRSMGGGLVPALVSEV-----LRNGRSAVHCQ---------AILSELV 89

  Fly    92 KYAPLHELMLELMERLEE------SSSINVFGAYLRALQVVLQRQGRDKPQAVEWSLNSIFTHLK 150
            :...:.|::..|::::::      :.||.|.   :..:|.||.|....|...:..:|:|:...:.
Zfish    90 QICRVKEVLNTLLQQVDDADPNAIADSIIVL---MPPIQSVLLRMSELKAPGLSMALDSLQKQIS 151

  Fly   151 DLPLPEYLSEGYDEAQARLIEQNEQVEDLLAHYITVGLFREPLRDEILQQDVRTPSQIFRDCGVN 215
            .||:|      |...|     :.|.|..|......|..|.:|...|:..||..:.:...| ..:.
Zfish   152 KLPVP------YSNKQ-----EQEDVYGLCRCCTAVLTFIQPFVQEVKNQDTNSEATSLR-AALL 204

  Fly   216 RRNIFT--CFFIQLLGRPLALLEMNHAKEDLTRSYVQQVTESLTQDANQ--------FLGDPFYL 270
            :..:||  |              ||..:|.|.::       .|.::.|:        |..:...:
Zfish   205 KLYVFTNVC--------------MNSLREPLLQA-------QLDREGNKTEILPLWNFAAEIMAI 248

  Fly   271 LNLVEQRARWLRKLDASRG-----VYEMSCQNVFLIEEKLPLHAVAMYYHSLFVGNQLPTNAPKV 330
            |.::::....:......||     :.:.:|.         |..:.|...:.|||........|.|
Zfish   249 LVVIQESLPKILFYHPVRGKEDDILEKQACH---------PNESKACIAYLLFVQLIAIDVFPAV 304

  Fly   331 YAPLFLFETIVYLAEVLLRQQEPPLQYCGLRLVEHHLSTLQH----SVPTSSLQLDVHKRFCEAL 391
            ::|:|:.:..:....:||.:::......||.|   |:.:|:.    |:|...|.|.......::|
Zfish   305 FSPVFVLQCNMEYINLLLSRKDESWILKGLDL---HVKSLERITACSLPVELLDLKPFHEVPQSL 366

  Fly   392 CKIVGYSPQVALRQLGIHVLRQFVLAFDDHGKYLILKNLMGTLQHGGLMGYLGGMYKDLVD---K 453
            .||:...|...||...:.|.:.|:...:...|:...:.::.|..|.|:...:....|:.|:   |
Zfish   367 IKIMIECPIQHLRGRSLVVFQLFIEKLNGEAKHKFFRRIIKTSHHAGVESTILKNIKNQVEQTRK 431

  Fly   454 ALGQSGPMPEVYSGKLFREMLLLCVCVLPHDVKSDLLLHSDRLCHALNILRYFAARDKNDVTGFW 518
            ::.|.|    .:.|.....:|...:| ||...::|||...||:..:||:|||...:.:...||.|
Zfish   432 SVYQDG----WFEGTRLISLLRDTIC-LPQGHETDLLHGMDRVMESLNLLRYLLIQKRGISTGEW 491

  Fly   519 QALPEIEKELLDPLGTALNFSMAHYKAYKERVEKGQSASDDELMQ----RQLNMLAVNISNSGMA 579
            ..|..|.:.....|...|:.|.::|....:|:.:.:.....|..:    |.:..|.|.....|..
Zfish   492 TDLCHIAETYTKLLRVCLSMSKSYYGTELKRLRENKKIKAKEFKEASGKRSVQSLIVKTETLGSM 556

  Fly   580 GGDAESKLPDIGRQEKLDVLASSITSLETLQSLYLRAREIIEQSAR 625
            ..:|:.|           ||..::.:.:.::||.:|..||||:|.:
Zfish   557 PPEAQDK-----------VLQCALVTCDLMESLVVRIEEIIEESQK 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30496NP_724595.1 Kinetochor_Ybp2 2..548 CDD:400745 115/548 (21%)
glmnbXP_009300664.1 Kinetochor_Ybp2 1..519 CDD:400745 115/546 (21%)

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